Pseudonocardia sp. DSM 110487: K1T35_12030
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Entry
K1T35_12030 CDS
T10356
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psds Pseudonocardia sp. DSM 110487
Pathway
psds03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K1T35_12030 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psds03400
]
K1T35_12030 (recD)
Enzymes [BR:
psds01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K1T35_12030 (recD)
DNA repair and recombination proteins [BR:
psds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K1T35_12030 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
UvrD-helicase
Viral_helicase1
AAA_22
Helicase_RecD
SH3_13
AAA_16
SLFN-g3_helicase
SRP54
TraI_hel_assoc_N
Glyoxalase_4
AAA_28
nSTAND3
AAA_5
AAA_24
DO-GTPase1
TrwB_AAD_bind
MukB
Motif
Other DBs
NCBI-ProteinID:
QYN37899
LinkDB
All DBs
Position
complement(2639296..2641119)
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AA seq
607 aa
AA seq
DB search
MTVDLGDVRLARAADGLLGVFNSAGVLDPADVHVATRIGRLGGETDEDVLLAVALAVRAV
RLGSVCVDLASVSHTVLGEGEEIVDVSALPWPDPPRWLAACAASTVVADGPHEPGGRPLR
LVDGLLYLARYWGEEEVVRRSLTERAAAAPPQVDVARLRAGLERYFSAPGSERQKLAAAV
SVLRRVTVLAGGPGTGKTTTVARLLALLHDQPGPPPRVALAAPTGKAAARLQEAVAAELP
AELRSSTPEAATLHRLLGWRPGGRFRYGRTQRLPFDVVVVDETSMVSLTMMARLLEAVRP
EARLVLVGDPDQLASVEAGAVLGDLARAPGRPEASLDAALDAAGVPGGLVGGSVINGVVT
LRHVWRFGGAIADFSRAVQAADADAAVALLRGGHPDLEFVEPDDVNGTRKDVVAAGRELT
EAALRGDVPTALAALERHRVLCAHRRGPYGVTRWSAEIERWLRAALPDAPAGPWYPGRPV
LVTANDYDVGLFNGDTGVAVAMPEGLRVAFARGGVPTLHPPARLSEVATVHAMTVHRGQG
SQFRRVTVVLPPAESPLLTRELLYTAVTRAAEFVRVVGTEEAVRAAVARPVSRASGLRHR
LASTHVT
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgatctcggcgatgtgaggctcgcccgcgcggccgacggcctgctcggcgtc
ttcaactccgcgggcgtgctcgatcccgccgacgtgcacgtggccacgcgaatcgggcgc
ctcggcggtgagaccgacgaggacgtcctgctcgcggtggcgctcgccgtgcgcgcggtg
cgcctcggctcggtgtgcgtcgacctcgcttcggtcagccacaccgtgctcggcgagggc
gaggagatcgtggacgtctccgcgctcccgtggcccgacccgccgcgctggctcgcggcg
tgcgcggcgagcaccgtcgtggccgacgggccgcacgaaccgggcgggcgcccgctgcgg
ctcgtcgacgggctgctctacctcgcgcgctactggggcgaggaggaggtggtgcgccgc
tcgctcacggagcgggccgcggccgctccgccccaggtcgacgtcgcacggctgcgggcc
gggctggagcggtacttctcggcgccgggttcggagcggcagaagctggcggccgcggtg
agcgttctgcggcgggtcacggtgctcgccggcggtccgggcaccggcaagaccaccacg
gtggcgcggctgctcgcgctgctgcacgaccagccgggcccgccgccgcgggtggcgctc
gccgcgcccaccggcaaggcggccgcccggctgcaggaggcggtcgcggccgagctgccc
gccgaactgcggtccagcacgccggaggcggccaccctgcaccggttgctcggctggcgg
ccgggtgggcgcttccggtacggccgcacccaacgactgccgttcgacgtggtggtggtc
gacgagacgtccatggtgtcgctcaccatgatggcccggctcttggaggccgtgcggccg
gaggcccggctcgtgctggtgggcgaccccgaccagctggcctcggtcgaggcgggcgcg
gtcctcggcgacctggcgcgcgctccggggcggccggaggcgagcctcgacgccgcactc
gatgccgcgggagtgccgggcggcctcgtcggcggctccgtgatcaacggcgtggtcacc
ctgcggcacgtgtggcggttcggcggcgcgattgcagacttctcccgggccgtgcaggcc
gccgacgccgacgccgcggtcgccctgctccgcggcggccaccccgacctggagttcgtc
gaacccgacgacgtgaacggaacccgcaaggacgtcgtggccgccggtcgtgagctcacc
gaggcggcgctgcgcggcgacgtccccaccgcgctcgccgcgctggagcgccaccgcgtg
ctgtgtgcccaccgcaggggcccgtacggcgtcacgcgctggagcgcggagatcgagcgg
tggctgcgtgccgccctgccggacgcgccggccgggccctggtacccgggccggcccgtg
ctggtcacggcgaacgactacgacgtgggcctgttcaacggcgacaccggcgtggcggtc
gccatgccggagggcctgcgggtcgcgttcgcccgcggcggggtgcccaccctgcacccg
ccggcccggctgtcggaggtggccaccgtccacgcgatgaccgtgcaccgcggtcagggc
agccagttccggcgggtcacggtggtgctgccgcccgccgagtccccgctgctcacccgg
gagctgctgtacacggcggtcacccgggccgccgagttcgtccgggtcgtcggcaccgag
gaggcagtgcgcgcggcggtggcccgcccggtcagccgagccagcggcctgcgccaccgg
ctcgcgtccacccacgtcacatga
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