Pseudonocardia sp. DSM 110487: K1T35_12035
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Entry
K1T35_12035 CDS
T10356
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psds Pseudonocardia sp. DSM 110487
Pathway
psds03440
Homologous recombination
Brite
Enzymes [BR:
psds01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K1T35_12035
DNA repair and recombination proteins [BR:
psds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K1T35_12035
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QYN40969
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Position
complement(2641116..2644472)
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AA seq
1118 aa
AA seq
DB search
MTVIPFPAPVLAPAAFDVCGELPTGTTVLEASAGTGKTFTIAALATRYVAEGYAALPELM
LVTFGREATQELRERVRERLVTAERGLADPVAARAGSDSVVALLADAPDPEVAARRARLA
RAIIQFDAATIATTHQFCQQMLAGLGVAGDGDRDAVFVESIDDVLTEVVDDFYVRKYGAR
GAGTPAFSRSEALALARRAVHDGQARLEPRDAEPGTAAHVRYRFAMAVRTEVARRKRVRR
IYTYDDMLTRLADALADPARGAAARLRARYRVVLVDEFQDTDPVQWQILRKAFHGSTTLV
LIGDPKQAIYAFRGADVVSYLDATDAADHHATLARNWRSDAPLLEALDTVFAGAALGDSR
ITVHPVESAHPGSRLRGAPVDTPLRLRVASRAGLPKAPRRDLAIVGPARELVARDAATDI
AALLASAATIEGAPVAPGDVAVLVRTNDQGAMIRHALAAEGVPAVLSGTASVFGTPVAGE
WLTLLEALEQPRAARVRAAALTPFLGHTVAELCGPDAEALLDEVGATLRAWAVVLHERGI
AALLEAITTGTGLPGRLLGVADGERLLTDLRHIAQTLHAAAVSEHLGPAALVEWLRHRIA
DAAQDVVVERSRRLESDADAVQIITIHRSKGLEFPVVYVPFAWDRNVRDPDVPLLHDETG
ARVLDVGGESGDGWKERVARHRAEEAGEDLRLLYVALTRARCQVVTWWVPATTTATSPLH
RLLIGRPPAGRDPAEVYRVPADNAALHALRELAGSRISAKRISVEEIGFSRSALTFSADE
PVGGELRAARFSRRLDIAWRRTSYSALTASASHGHGPGVGSEPEAPGIDDEAAVELETGS
DLAGVPSPMAELPLGAGFGTLVHGIFEAADLTAADLPGELIARAREQVVHHPVPGVDAEQ
LGAALLPAVQTPLGPLAGGLRLADIAPRDRLAELDFELPLAGGDTPGRPVALGAVAPLLR
THLPADDPLHPYPDALDGLDEQPLRGYLTGSIDAVLRLPGSRFAVVDYKTNWLGPMGPEG
REPLTSAHYTPPRLAEAMIAAHYPLQALLYSVALHRYLRWRLPGYAPERHLGGVLYLFVR
GMCGPDTPVVDGVPCGVFSWAPPAPLVVELSQLLDGAI
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcatcccgttccccgccccggtgctcgcacccgccgcgttcgacgtctgcggc
gagctgcccaccggcaccaccgtcctcgaggcgagcgccggcaccggcaagaccttcacg
atcgcggcgctcgccacccgctacgtcgcggagggctacgcggcgctgcccgagctcatg
ctcgtcacgttcggccgggaggccacccaggagctgcgcgagcgcgtgcgggagcgcctc
gtcaccgccgagcgcggcctggccgaccccgtggccgcccgcgccgggagcgactcggtg
gtcgcgctgctcgccgacgcgcccgatcccgaggtcgcggcccgccgcgcccggctggcc
cgcgcgatcatccagttcgacgcggccaccatcgccaccacccaccagttctgccagcag
atgctcgccgggctcggcgtggcgggcgacggcgatcgcgacgccgtgttcgtggagtcg
atcgacgacgtcctcacggaggtcgtcgacgacttctacgtccgcaagtacggcgcacgg
ggagccggcacgcccgcgttcagccggagcgaggccctcgccctcgcccgccgggccgtg
cacgacgggcaggcgcggctcgaaccgcgcgacgccgagccgggcaccgccgcccacgtc
cgttaccgcttcgccatggccgtgcgcaccgaggtcgcgcggcgcaagcgggtgcggcgc
atctacacctacgacgacatgctcacccggctcgccgacgcgctggccgacccggcgcgg
ggggcggccgcgcggctgcgggcgcgctaccgggtggtgctggtcgacgagttccaggac
accgacccggtgcagtggcagatcctgcgcaaggccttccacgggtccaccaccctggtg
ctgatcggcgacccgaagcaggcgatctacgcgttccgcggggccgacgtcgtcagctac
ctcgacgccaccgacgccgccgaccaccacgccaccctggcccgcaactggcgcagcgac
gccccgctgctcgaggcgctcgacacggtgttcgcgggcgcggcgctcggcgactcgcgg
atcacggtgcatcccgtggagtccgcccaccccggcagccggctgcgcggcgcacccgtc
gacacgccgttgcggctgcgggtggcatcgcgggccgggctccccaaggcgccgcggcgc
gacctcgcaatcgtcggcccggcccgcgagctcgtggcccgcgacgcggccaccgacatc
gcggcgctgctcgcgagcgccgccacgatcgagggcgcgccggtggcgcccggcgacgtc
gctgtgctggtccgcaccaacgaccagggcgcgatgatccgccatgccctcgccgccgag
ggggtgcccgctgtgctgtccggcaccgcgagcgtgttcggcaccccggtcgccggggag
tggctcacgctgctggaggccctcgaacagccgcgggccgcccgggtgcgggccgccgcg
ctcaccccttttctcggccacacggtcgccgagctctgcgggcccgacgccgaggcgctg
ctcgacgaagtcggcgccacgctgcgcgcgtgggccgtggtgctgcacgagcgcgggatc
gccgcgctgctggaggccatcaccaccggcaccgggctgcccggccgcctgctcggcgtc
gccgacggggagcggctgctcaccgacctgcgccacatcgcccagacactgcacgccgcg
gcggtgtccgagcacctcggcccggccgcgctggtggagtggctgcgccaccgcatcgcc
gacgccgcccaggacgtcgtggtcgagcggagcaggcggctggagtccgacgcggacgcc
gtgcagatcatcacgatccaccgcagcaagggcctcgagttccccgtcgtctacgtgccg
ttcgcgtgggatcgcaacgtccgcgacccggacgttccgctgctgcacgacgagacgggc
gcccgggtactcgacgtgggcggcgagtccggcgacgggtggaaggagcgggtcgctcgg
caccgcgctgaggaggcgggcgaggacctgcggctgctctacgtggcgctcacgcgggcg
cgctgccaggtggtcacctggtgggtgcccgccaccaccacggccacgtcgccgctgcac
cggctgctgatcgggcggccccccgcgggccgcgaccccgcggaggtctaccgcgtgccc
gccgacaacgcggcactccacgcgctgcgtgagctcgccgggagccggatctcagccaaa
aggatctcggtcgaggagatcgggttctcgcggagcgcgctcacgttctccgctgacgag
ccggtagggggcgagctgcgtgccgcgcggttctcccgccggctcgacatcgcatggcgg
cgcacgtcctacagcgcgctcacggccagcgcgagccacggtcacgggccgggcgtcggc
agcgagcccgaggcaccggggatcgacgacgaggccgcggtcgagctggagaccggctcc
gacctcgccggcgtgccgtcgccgatggccgagctgccgctcggggccggcttcggcacg
ctggtgcacgggatcttcgaggcggccgacctcacggccgccgacctgcccggcgagctc
atcgcccgcgcccgcgagcaagtcgtgcaccacccggtgccgggcgtcgatgccgagcag
ctgggggcggcactgctcccggccgtgcagacgccgctcggcccccttgccggtggcctg
cgcctcgccgacatcgcgccgcgcgaccggctcgccgagctcgacttcgagctccccctc
gcaggcggcgacacccccggccgaccggtcgccctcggcgccgtcgcaccgctgctgcgc
acgcacctgcccgccgacgacccgctgcacccgtaccccgacgcgctcgacgggctcgac
gagcagccgctgcgcggctacctcaccggcagcatcgacgccgtgctgcggctgcccggc
tcgcggttcgcggtggtggactacaagaccaactggctcggcccgatgggtcccgaggga
cgcgagccgctcacgtccgcccattacacgccgccacggctcgccgaggcgatgatcgcc
gcccattatccgttgcaggcgctgctctacagcgtggcgctgcaccgctacctgcgctgg
cgattgcccggatacgcgccggagcgccacctcggcggggtgctgtacctgttcgtgcgc
gggatgtgcggccccgacaccccggtggtcgacggcgtgccgtgcggggtgttcagctgg
gcgccgcccgccccgctcgtggtggagctctcgcagctgctggacggtgcgatatga
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