Pseudonocardia sp. DSM 110487: K1T35_12040
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Entry
K1T35_12040 CDS
T10356
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psds Pseudonocardia sp. DSM 110487
Pathway
psds03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K1T35_12040 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psds03400
]
K1T35_12040 (recC)
Enzymes [BR:
psds01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K1T35_12040 (recC)
DNA repair and recombination proteins [BR:
psds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K1T35_12040 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF3606
Motif
Other DBs
NCBI-ProteinID:
QYN37900
LinkDB
All DBs
Position
complement(2644469..2647744)
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AA seq
1091 aa
AA seq
DB search
MWHLHRAERADTLARALGELLGEPPADPFAAEVVAVPARGVERWLAQRLAHRLGSADGGG
DGVCAGVAFPSPAAVVAEVVAAATGLAPDDDPWQPERAVWPLLEVIDASVGEEWCAPLGA
HVGDAGRGRRYAVARHLTDLFAAYATHRPALLTAWLAGAGDPEGGAADLAWQPELWRRLR
ERIGAPSPAERLEAACAVLRADPDVVPLPARVSIFGPTRLPAEHLAVLAALAERRDVHLW
LPHPSPALWAAVVAPPEIPLRRADPTAATPRHPLLGSLGRDARELQLRLPAECVDTHHAA
DEGPPVTLLQRLQADLRDDRAPDGGFVVAPGDRSVQVHSCHGPDRQVEVLREIVLGLLEA
DPTLEPRDVLVMCPDVETFAPLVSACFGLADGPDAHPGQRLQVRIADRALRQVNPLLDTV
AQLLELADSRATTSQLLDLLASAPVRGRFDLDDADLERLRELVVRSGVRWGLDGAHRAPF
QLDGFPQNTWSAGLDRLLLGVAMSGADHEWLGTALPLDEVESGDVARLGRLAEFVERVAA
VLADLAGQQPLDRWVAVLQHGLDALTLVTGTDEWQGTQARAELAAAVRAAGPHAATVELG
LADVRGLLAERLRGRPTRANFRTGTLTVATLVPMRSVPHRVICLLGLDDGAFPRAGVPDG
DDLLARDPLVGERDPRSEDRQLFLDAIRAATEHLVVVHSGADERTGARRPPAVPLGELLD
AIAATAGAEALDQVVVRHPLQPFDPRNFAGPAPFSFDRAELAGAVAATNAKAPPAPFLVD
PLPPAGDDGVIALDELVSFVEHPVKEFLRQRVGLSLFTAEEQDTDSLPVDLDGLAIWSIG
DRLLRDRLAGRPLDLCRQAEWRRGELPPGALGEQVLFRVLDDVEPIVAAAQPHLAGEAGD
RDVDVTLPDGTRVVGTIGGLHGNVLLRVEFSRLAAKQRVRAWVRLLALTAATREPWRAVT
IGRGQKFGLQMATAGPLDPDRAAAELAELVALRRSGLREPLPLPTVAGHTYASVRRGGAD
PAGALDEALRKWTSGAGAERADTAHVKAWGPAAGPEVLTAAGPPGGEPTRFGTLALQVWS
PLLAAEDVVRL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtggcacctgcaccgggccgaacgggccgacacgctggcccgcgcgctgggcgagctg
ctgggtgagccgccggccgacccgttcgccgccgaggtcgtcgcggtaccggccaggggc
gtggagcggtggttggcacagcggctcgctcaccggctcgggtcggccgacggaggcggc
gacggcgtgtgcgccggcgtggctttcccctcgcccgccgcggtggtggccgaggtcgtc
gcggcggccaccggcctggctcccgacgacgacccgtggcagccggagcgagcggtgtgg
ccgctgctggaggtgatcgacgcgagcgtcggggaggagtggtgcgccccgctcggtgcg
cacgtgggtgacgcggggcggggccgccggtacgccgtcgcgcgccacctcaccgatctc
ttcgccgcctacgccacccaccggcccgcgctgctcaccgcatggctggccggcgccgga
gatccggagggcggcgcggccgacctcgcgtggcaaccggagctgtggcggcggctccgc
gagcggatcggcgccccctcccccgccgagcgcctggaggcggcgtgcgcggtcctgcgc
gccgacccggatgtcgtcccgttgccggcccgggtgtcgatcttcggccccacccgcctg
cccgccgagcacctcgcggtactggcggcgctcgccgagcgccgcgacgtgcacctgtgg
ctgccccacccctcccccgcactgtgggccgccgtcgtggcgccgcccgagatcccgctc
cggcgcgccgatcccaccgccgccacaccccgccacccgctgctgggctccctcggccgc
gacgcccgtgagctgcagctccggctccccgcggagtgcgtcgacacccaccacgcggcg
gacgagggcccgccggtcacgctcctgcagcggctccaggccgacctgcgcgacgaccgc
gcgcccgacggcgggttcgtggtggcgcccggcgaccgcagcgtgcaggtgcactcctgc
cacggccccgaccggcaggtcgaggtgctgcgggagatcgtgctcgggctgctcgaggcc
gaccccaccctcgaaccgcgcgacgtgctggtgatgtgccccgacgtcgagacgttcgcg
ccgctggtctcggcctgcttcgggctcgccgacgggcccgacgcccaccctggccagcgc
ctgcaggtccgcatcgccgaccgcgcgctgcgccaggtcaacccgctgctcgacacggtg
gcgcagctgctggagctggccgactcccgcgccaccacctcgcagctgctcgacctgctc
gccagcgcgccggtgcgcgggcgcttcgacctcgacgacgccgacctcgagcggctgcgc
gagctcgtggtccgctccggggtccggtgggggctcgacggcgcgcaccgggcgccgttc
cagctcgacgggttcccgcagaacacctggtccgcgggcctcgatcggctgctgctcggc
gtggcgatgtccggcgccgaccacgagtggctcggcacggcactgccgctggacgaggtc
gagtccggcgacgtcgcccggctcgggcggctcgcggagttcgtcgagcgggtcgcggcc
gttctggcggacctggccgggcagcagccactcgaccggtgggtcgcggtgctccagcac
ggcctcgacgcgctcaccctcgtcaccggcaccgacgagtggcagggcacgcaggcgcgg
gccgagctcgccgcggccgtccgcgcggcggggccgcacgccgccacggtcgagctcggg
ctcgccgacgtccgcgggctgctcgccgagcggctgcgcggccggcccacccgggccaac
ttccgcaccggcacgctcaccgtcgccacgctggtgccgatgcggtcggtgccgcaccgc
gtgatctgcctgctcggcctcgacgacggcgccttcccacgggccggtgtgcccgacggc
gacgacctgctcgcccgcgacccgctcgtcggcgaacgcgacccgcgcagcgaggaccgc
cagctcttcctcgacgcgatccgcgccgccaccgagcacctcgtcgtggtgcactccggc
gccgacgagcgcaccggcgcccgcaggccaccggccgtgccgctcggggagctgctcgac
gccatcgcggccaccgcgggcgcggaggcgctcgaccaggtggtggtgcgccacccgctg
cagcccttcgacccgcgcaacttcgcggggccggcgccgttcagcttcgaccgagccgag
ctcgcgggggcggtggcggccacgaacgcgaaggccccgcccgctccgttcctggtcgat
ccgctgccccctgccggggacgacggtgtgatcgcgctcgacgagctggtgtcgttcgtc
gagcacccggtgaaggagttcctgcgccaacgggtggggctctcgctgttcaccgctgag
gagcaggacaccgactcgctgccggtcgacctcgacgggctcgcgatctggtcgatcggc
gaccggctgctgcgcgaccggctcgccggacggccccttgatctctgcaggcaggccgag
tggcgccgcggggagctgccgccgggcgcgctgggcgagcaggtgctcttccgggtgctc
gacgacgtcgagccgatcgtcgccgccgcccagccccatctcgcgggcgaggcgggcgac
cgcgacgtcgacgtcacgctgcccgacggcacccgcgtcgtcggcacgatcggcgggctg
cacgggaacgtgctccttcgcgtcgagttctcccggctcgcggccaagcagcgggtgcgg
gcctgggtgcggctgctcgcgctcaccgcggccacccgggagccatggcgcgcggtcacg
atcgggcgcgggcagaagttcggcctccagatggccaccgcgggcccgctcgaccccgac
cgcgccgccgccgagctcgccgaactggtggcgctgcggcgctcggggctgcgcgagccg
ctgccgctgcccaccgtcgccggccacacctacgcgtccgtccgccgcggcggtgccgac
ccggcgggcgcgctcgacgaggcgctgcgcaagtggacgagcggcgccggggccgagcgc
gccgacaccgcgcacgtcaaggcatggggcccggccgcaggccccgaggtgctcaccgcg
gccggaccacccggtggcgaacccacccggttcggcacgctcgcgctgcaggtctggtcc
ccgttgctcgcggcagaagatgtggttcggctgtga
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