Pseudonocardia sp. DSM 110487: K1T35_14785
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Entry
K1T35_14785 CDS
T10356
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
psds Pseudonocardia sp. DSM 110487
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psds03021
]
K1T35_14785
Transcription machinery [BR:
psds03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K1T35_14785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_28
Sigma70_r4_2
MM_CoA_mutase
Motif
Other DBs
NCBI-ProteinID:
QYN40249
LinkDB
All DBs
Position
complement(3188473..3189450)
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AA seq
325 aa
AA seq
DB search
MGDRSEEITPEISAEDLDAQSPAADLVRVYLNGIGKTALLTAAQEVDLARRIEAGVFAQH
VLDEAAPGDLDKQYAADLRAIVRDGRRARNHLLEANLRLVVSLAKRYTGRGMPLLDLIQE
GNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRGMADQARTIRLPVHLVEQVNKLARIK
RDLHQKLGRDATHEELAAESGIAEEKIADLLDHARDPVSLDMPVGSEEEAPLGDFIEDGE
ATDAETTVISHLLHDDLRRVLGTLEEREQSVIRMRYGLDDGQPRTLDQIGRRFGLSRERV
RQIEREVMAKLRIGERADRLRAYAS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atcggcgatcgttccgaggagatcacccccgagatctccgcggaggacctcgacgcccag
agtccagcggccgacctggtccgcgtctacctgaacggaatcggcaagaccgcgctgctc
acggcggcgcaggaggtcgacctggccaggcgcatcgaggccggcgtgttcgcccagcac
gtgctcgacgaggcagcgcccggcgatctcgacaagcagtacgccgccgacctgcgggcg
atcgtccgcgacggccgacgggcccgcaaccacctgctcgaggccaacctgcgcctcgtc
gtgtcgctggccaagcgctacaccggccgcggcatgccgctgctggacctgatccaggag
ggcaacctcggcctgatccgtgcggtcgagaagttcgactacaccaagggcttcaagttc
tcgacctacgccacgtggtggatccgccaggcgatcacgcgcgggatggccgaccaggcc
cgcaccatccgcctgcccgtccacctcgtggagcaggtcaacaagctggcgcggatcaag
cgtgacctgcaccagaagctcggccgcgacgccacgcacgaggagctcgccgccgagtcg
ggcatcgccgaggagaagatcgccgacctgctcgaccacgctcgcgacccggtgagcctg
gacatgccggtcgggtccgaggaggaggcgccgctcggcgacttcatcgaggacggcgag
gccaccgacgccgagaccacggtcatctcgcacctgctgcacgacgacctgcgccgcgtg
ctcggcaccctcgaggagcgcgagcagtcggtcatccggatgcgctacggcctcgacgac
ggccagccgcgcaccctcgaccagatcggccgccgcttcgggctctcccgggagcgcgtg
cgccagatcgagcgcgaggtcatggccaagctgcggatcggtgagcgcgccgaccggctg
cgcgcctacgccagctga
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