Pseudonocardia sp. DSM 110487: K1T35_24720
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Entry
K1T35_24720 CDS
T10356
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
psds Pseudonocardia sp. DSM 110487
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psds03021
]
K1T35_24720
Transcription machinery [BR:
psds03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K1T35_24720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_24
DUF7343
HTH_3
MarR_2
MarR
Sigma70_ECF
HTH_31
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QYN31846
LinkDB
All DBs
Position
5287715..5288485
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AA seq
256 aa
AA seq
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MSDTSRDSDYGHLSPLFEEFAALPPDHPERPAIRAKLVTGYLPVVQHIARRFAGRGEPVD
DLEQAGTVGLLNAVDRFEPHRGIDFLSYAVPTITGEIRRHFRDRTWSMRVPRRLKDLQSA
INGAIGPLSQELGRAPRPSEIAARLGLPTEDVVEGLDAQQAYRSSSLDELVAGADTPLTD
TLGDVDAELDKVEYRETLAPLLDELPERERTILLLRFFGNLTQTQIADRVGISQMHVSRL
LSQTVAQLRRRMTEDG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacgtcccgtgactccgattacggccacctctcgccgctgttcgaggagttc
gcggccctgccgccggaccaccccgaacggccggccatccgggccaagctcgtcaccggt
tacctgccggtggtgcagcacatcgcacgccggttcgccggccgcggagaacccgtcgac
gacctcgagcaggccggcacggtagggctgctcaacgcggtggaccggttcgagcctcac
cggggcatcgacttcctgtcctacgcggtcccgaccatcaccggcgagatccggcgccat
ttccgcgaccggacctggtcgatgcgcgtaccgcgacgcctcaaggacctgcagagcgcg
atcaacggcgcgatcggcccgttgtcgcaggagctcgggcgcgccccgcgccccagcgag
atcgccgcgaggctcggcctgcccaccgaggacgtcgtggagggcctcgacgcccagcag
gcgtaccgcagcagctccctcgacgagctggtggccggcgcggacacccccctcaccgac
acgctgggcgacgtggacgccgagctggacaaggtcgagtaccgcgagacgctcgcaccg
ctgctcgacgagctgcccgagcgggagcgcacgatcctgctgctgcgcttcttcggcaac
ctcacgcagacccagatcgccgaccgggtcgggatctcgcagatgcacgtctcccgcctg
ctgtcccagacggtcgcgcagctgcggcgccggatgaccgaagacggatag
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