Pseudonocardia sp. DSM 110487: K1T35_25815
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Entry
K1T35_25815 CDS
T10356
Name
(GenBank) DEAD/DEAH box helicase
Organism
psds Pseudonocardia sp. DSM 110487
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
BssS
Motif
Other DBs
NCBI-ProteinID:
QYN32037
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Position
5548655..5551762
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AA seq
1035 aa
AA seq
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MLAVHALWSPGRGVLLWAEDGDRPPGSSSRSLRPARPHPFAAPVSALAALHPGKPATATL
LLPSRPGGPLASPELVRSAGRNGSGRGGAPRGGPVLRAWTVPALAVDAAELDDPADEARY
GSSVAHLRAVAALAADLAARGRVLPTLRRHGGRAFARWRPVVQGLDAVAFDALVGALPPV
GRAEALAPDTGPDPHDLLADALEALTDAAVRDRMARAPEPVTLVPPRPGALPATEAWLAA
LLTADGRIDDTVPITELSALEDAVAEWDAVGADTTGEGRASFRLSEISTLHDPSDPDPDT
LDQTGEGTRWVLEFLLQSTADPSLLVPAEQVWAGAAERLLAEPQELLLAELGRAALVYPA
LARALRQARPGHLDLTVDDTHEFLTTRAALLVEAGFGVHLPRGWDGARRVGLTLSARSTP
ADRVLTRSGLGREQLAEFRWSIAVGDEELSEEEISELVATKAPLVRLRGRWVSVDVDRLR
KGLEFLRRARTRRDAGAPTAAQVLALAQRHPDDWDDGEVPLPVTDIRADGWIGELLAGTA
EQTITPIEPPQSFQAQLRPYQQRGVSWLAFLSALGLGACLADDMGLGKTVQLLALEAYER
AHEKRAPTLLICPMSLVGTWQREAAKFAPGLRVLAHHGAGRAHGEELHTAVAEADLVVTT
YATAARDGDDLAPVSWRRLALDEAQAVKNSRATHARAVRRFTAEHRVALTGTPVENRLSE
LWSIMDVLNPGLLGSADAFRIRYAIPVERHGSKDAAALLRRVTRPYLLRRVKTDPTIIDD
LPDKIEVTQHYRLTREQASLYRTVVDDMLEKIEDSEGIERRGNVLAAMAKLKQVCNHPAQ
LLHDGSPIGRRSGKIIRLEEILAEILDEGDRVLCFTQFTEFGHMLVPHLSARFDTDVAFL
HGGTTKKRRDEMVTRFQAGDGPPIMLLSLKAGGTGLTLTAANHVVHLDRWWNPAVENQAT
DRAFRIGQRRNVQVRKFVCPGTVEERIDELIIKKKALSSMVVGDGEGWLTELSTESLREL
FTLGAEALQEEAEDA
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgccgtccacgccctctggtcccccggccgcggggtgctgctctgggccgaggac
ggcgaccggccgcccggctcgtccagccggtcgctgcgccccgcccggccgcacccgttc
gcggcgccggtgtccgcactcgcggcactgcacccgggcaagccggccacggccacgctc
ctgctgccctcacgccctggcgggccgctcgcatcgcccgagctggtgcgcagtgcgggc
aggaatgggtcgggccggggcggggcgccgcgcggcgggcccgtgctgcgggcctggacg
gtgcccgcgctcgccgtcgacgcagccgagctggacgacccggccgacgaggcgcgctac
ggctcctccgtcgcccacctgcgcgccgtggcggcactggccgccgacctcgccgcccgc
gggagggtgctgcccaccctgcgccgccacggtggcagggcgttcgcccgatggcgcccg
gtcgtgcaggggctcgacgctgtcgcgttcgacgcgctggtgggcgcgttgccgccggtc
gggcgggccgaagcgctcgcgccggacaccgggcccgacccgcacgatctgctcgccgac
gcgctcgaagccctcaccgacgccgccgtgcgcgaccggatggcccgcgcacccgagccg
gtcacactggtgccaccgcggcccggcgccctgccggccacggaggcatggctcgccgcc
ctgctcaccgccgacggccggatcgacgacaccgtcccgatcacggagctctccgccctc
gaggacgccgtcgccgaatgggacgcggtcggcgccgacaccaccggggagggccgggcc
tccttccggctctcggagatcagcacgctgcacgacccgtccgatcccgatcccgacacg
ctcgaccagaccggcgagggcacccgctgggtgctggagttcctgctgcagtccacggcc
gacccgagcctgctcgtgccggccgagcaggtgtgggccggcgccgcggagcggctgctc
gccgagccccaggagctgctgctcgccgagctgggcagggcggcgctggtgtacccggcg
ctcgcgcgggcgttgcggcaggcgcggcccggccatctcgacctcaccgtcgacgacacc
cacgagttcctcaccacgcgcgccgcgctgctcgtcgaggccgggttcggggtgcacctg
ccccgcggctgggacggcgcgcgccgggtggggctcacgctgtccgcccgcagcaccccg
gccgatcgcgtgctcacccgcagcgggctgggtcgcgagcagctggcggagttccgctgg
tcgatcgcggtgggcgacgaggagctgtcagaggaggagatcagcgagctcgtcgccacc
aaggcgccgctcgtgcggctgcgcggccgatgggtgagcgtcgacgtcgaccggctgcgc
aaaggcctggagttcctgcgccgcgcccgcacccgccgcgacgcgggcgcccccaccgcc
gcccaggtgctcgcgctcgcccagcgccaccccgacgactgggacgacggggaggtcccg
ctccccgtcaccgacatccgcgccgacggctggataggcgagctgctcgccggcaccgcg
gagcagacgatcaccccgatcgagccgccgcagagcttccaggcccaactgcgcccctac
cagcagcggggggtgtcctggctcgcgttcctgtccgcgctcgggctgggcgcatgcctc
gccgacgacatggggctgggcaagaccgtccagctgctcgccctcgaggcctacgagcgg
gcgcacgagaagcgagcacccacgctgctgatctgccccatgtcactggtcggcacatgg
cagcgggaggccgcgaagttcgcgcccggcctgcgcgtgctcgcccaccacggcgcgggc
cgcgcccacggcgaggagctccacaccgccgtcgccgaggccgacctcgtggtcaccacc
tacgccaccgcggcccgcgacggcgacgacctcgccccggtgtcgtggcgacggctcgcg
ctcgacgaggcgcaggccgtgaagaacagccgggccacgcacgcgcgcgccgtgcgccgg
ttcaccgcggagcaccgcgttgcgctcaccggcactccggtggagaaccggctctccgag
ctctggtcgatcatggacgtgctcaaccccggcctgctcggctccgccgatgccttccgc
atccgctacgcgatcccggtggagcgccacggcagcaaggacgcggccgcgctgctgcgc
cgcgtcacccgcccgtacctgctgcgccgggtcaagaccgaccccaccatcatcgacgac
ctgcccgacaagatcgaggtcacccagcactaccggctcacccgcgaacaggcctcgctc
taccgcaccgtcgtcgacgacatgctggagaagatcgaggactccgagggcatcgaacgg
cgcggcaacgtgctcgccgccatggccaagctcaagcaggtctgcaaccaccccgcacag
ctgctgcacgacggatccccgatcggcaggcgctccggcaagatcatccggctggaggag
atcctcgccgagatcctcgacgagggcgaccgcgtgctgtgcttcacccagttcaccgag
ttcggccacatgctcgtcccgcacctctcggcccgcttcgacacggatgtcgcgttcctg
cacggcggcaccacgaagaagcgccgtgacgagatggtcacgcggttccaggccggtgac
ggcccgccgatcatgctgctctcgctcaaggccggtggcaccgggctcacgctcacggcc
gccaaccacgtcgtccacctcgaccgctggtggaaccccgcggtcgagaaccaggccacc
gaccgcgcgttccgcatcggccagcgccgcaacgtgcaggtgcgcaagttcgtgtgcccc
ggcacggtcgaggagcgcatcgacgagctgatcatcaagaagaaggcgctgtcctccatg
gtcgtcggcgacggtgagggctggctcacggagctgtccaccgagtcgctgcgggagctg
ttcacgctcggcgcagaggcactgcaggaggaggcagaggatgcctga
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