Pseudonocardia sp. DSM 110487: K1T35_38960
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Entry
K1T35_38960 CDS
T10356
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psds Pseudonocardia sp. DSM 110487
Pathway
psds03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K1T35_38960 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psds03019
]
K1T35_38960 (orn)
03009 Ribosome biogenesis [BR:
psds03009
]
K1T35_38960 (orn)
Messenger RNA biogenesis [BR:
psds03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K1T35_38960 (orn)
Ribosome biogenesis [BR:
psds03009
]
Eukaryotic type
Pre-60S particles
RNases
K1T35_38960 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QYN34339
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All DBs
Position
8318973..8319599
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AA seq
208 aa
AA seq
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MTDRLVWIDCEMTGLDLGRDALIEIAVLVTDGDLRVLGEGIDLVIHADETALAGMPEIVR
EMHERSGLTDAVRASTVTIAEAEQLALDYVRQHVPDARSAPLAGNSIATDRAFLARDMPA
LDGYLHYRMVDVSSVKELARRWYPRVFYAKPEKGLAHRALADIMESIRELEYYRRTLFAP
PPGPTSEAAQAVAASLPATRFEVPHPPR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaccgtctggtgtggatcgactgcgagatgaccgggctcgacctcggacgcgac
gcgctcatcgagatcgccgtgctcgtcaccgacggtgacctcagggtgctcggcgagggc
atcgacctcgtcatccacgccgacgagaccgccctcgcgggcatgcccgagatcgtgcgc
gagatgcacgagcgatcagggctcaccgacgcggtccgcgcctccaccgtgacgatcgcc
gaggccgagcagctcgcgctcgactacgtgcgccagcacgtccccgacgcccgcagcgcc
ccgctcgccgggaactcgatcgccaccgaccgcgcgttcctcgcccgcgacatgccggcg
ctcgacggctacctgcactaccgcatggtcgacgtcagctccgtcaaggagctcgcccgg
cgctggtatccccgcgtgttctacgccaagccggagaagggcctcgcccaccgcgccctc
gccgacatcatggagtcgatccgcgaactcgagtactaccgccgcacgctgttcgcgccc
cctccaggaccgaccagcgaggccgcccaggccgtcgccgcgagcctcccggcaacccgc
ttcgaagtcccccatccgccacgctaa
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