Pseudonocardia sp. DSM 110487: K1T35_42815
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Entry
K1T35_42815 CDS
T10356
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psds Pseudonocardia sp. DSM 110487
Pathway
psds03420
Nucleotide excision repair
psds03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K1T35_42815 (pcrA)
03430 Mismatch repair
K1T35_42815 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psds03400
]
K1T35_42815 (pcrA)
Enzymes [BR:
psds01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K1T35_42815 (pcrA)
DNA repair and recombination proteins [BR:
psds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K1T35_42815 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
K1T35_42815 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DUF7120
DUF1465
Motif
Other DBs
NCBI-ProteinID:
QYN35006
LinkDB
All DBs
Position
complement(9110170..9112500)
Genome browser
AA seq
776 aa
AA seq
DB search
MSALFELPTENPVQPRTERGAALLEGLNPRQREAVVHAGTPLLIVAGAGSGKTRVLTHRI
AWLLAERGVHPGEIMSITFTNKAAAEMKERVDALVGRRGNAMWVSTFHSMCVRILRREAK
HLGVRSAFSVYDADDTRRLVGLVLRDLELDPKKFSARGVAAQISNLKNELLSADDAAERA
ANDFERKVAEVYGVYQARLRTANAFDFDDLIMETVALLQRLPAVAEYYRRRFRHVLVDEY
QDTNHAQYVLVRELVAPAADGVEPGELCVVGDSDQSIYAFRGASIRNIIEFEQDFPNART
IMLEQNYRSTQRILSAANAVIARNPDRRDKRLWSDQGDGAKVVGYVADNEHDEAAFVAQE
IDRLVDSGEFRNSDVAVFYRTNSQSRVFEDVFLRVGLPYKVVGGVRFYERKEVRDALAYL
RVLSNPEDTVSLRRILNVPKRGIGERAEELVATYADRERTSFAAALRIAAEQPERIPGLV
TRSQRCIASFVQLLDELNELVERGDETAEILEAVYARTGYTAELEASDDPQDGSRRENLA
ELVTVAREFAGDAAVADLDDSDVEVGAPAPGSLAAFLERVALVADADSIPDNDEGMVTLM
TLHTAKGLEFPVVFLTGWEDGVFPHMRAMGDAAELAEERRLAYVGITRARQRLYLSRAMI
RSSFGQPNANPASRFLAEVPDDLVEWRRAESERSAPVGRFGFGRRPAATDRGSWNVPKAA
LKASISLDVGDRVNHDKYGLGTVVESDKATQRVLIDFGSAGTVRLMLIGGVPLQKL
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctgttcgaactgcctacagagaaccctgtccagccccgcacggagcgcggt
gctgcgctgctggaggggctcaatccgcgccagcgcgaggcggtggtccacgccgggacg
ccgctgctgatcgtcgcgggggcgggctcgggcaagacccgtgtgctcacccaccgcatc
gcgtggctgctcgccgagcgcggggtccaccccggcgagatcatgtcgatcaccttcacc
aacaaggcagccgccgagatgaaggagcgcgtcgacgcgctcgtcggcaggcgcggcaac
gcgatgtgggtgtccacgttccactcgatgtgcgtgcgcatcctgcgtcgcgaggccaag
cacctcggcgtgcgcagcgcgttctccgtctacgacgccgacgacacgcgccggctcgtc
ggcctggtcctgcgtgatctggagctcgacccgaagaagttctccgcccgtggggtcgcg
gcgcagatctcgaacctcaagaacgagctgctgtcggccgacgacgccgccgagcgggcc
gccaacgacttcgagcgcaaggtcgccgaggtctacggggtgtaccaggcgcggctgcgc
acggccaacgcgttcgacttcgacgacttgatcatggagaccgtcgcgctgctgcagcgg
ctgccggccgttgccgagtactaccggcgccggttccggcacgtgctggtcgacgagtac
caggacaccaaccacgcccagtacgtgctggtgcgcgagctcgtcgcccccgccgccgac
ggagtcgagccgggcgagctgtgcgtggtgggcgactccgaccagtcgatctacgcgttc
cgcggcgcgagcatccgcaacatcatcgagttcgagcaggacttcccgaacgcgcgaacg
atcatgctggagcagaactaccgctccacccagcgcatcctctcggcggccaacgcggtc
atcgcgcgcaacccggaccggcgcgacaagcggctgtggtccgatcagggcgatggcgcg
aaggtggtcgggtacgtcgccgacaacgaacacgacgaggccgcgttcgtcgcgcaggag
atcgaccggctggtggattccggtgagttccggaattccgatgtcgcggtcttctaccgc
accaactcccagtcgcgcgtgttcgaggacgtgttcctgcgcgtcggactgccgtacaag
gtcgtgggcggggtgcgtttctacgagcgcaaggaggtgcgcgacgcgctggcgtaccta
cgggtgctgtccaaccctgaggacaccgtcagcctgcgccgcatcctcaacgtccccaag
cgcggcatcggcgagcgcgccgaggagctggtggccacctacgccgaccgggagcgcacc
tcgttcgccgccgcgctgcggatcgcggcagagcagccggagcggattcccgggctggtc
acgcggtcgcagcggtgcatcgcctcgttcgtccagctgctcgacgagctgaacgagctg
gtggagcgcggcgacgaaacggcggagatcctggaggccgtctacgcgcgcaccggctac
accgccgagctggaggcgagcgacgacccgcaggacggctcgcgccgcgagaacctcgcg
gagctcgtcacggtggcgcgcgagttcgcgggcgacgccgctgtcgccgacctcgacgac
tccgacgtcgaggtgggagcgcccgctcccggctcgctcgcggcgttcctggagcgggtg
gcgctggtcgccgacgccgactcgatccccgacaacgacgagggcatggtcacgctgatg
accctgcacacggcgaagggtctcgagttcccggtcgtgttcctcaccggttgggaggac
ggcgtgttcccgcacatgcgggcgatgggcgatgcggccgagctggccgaggagcggcgc
ctcgcctacgtcggcatcacgcgggcgcggcagcggctgtacctgtcccgggcgatgatc
cgctcgtcgttcgggcagcccaacgccaacccggcgtcgcggttcctcgccgaggtgccc
gatgacctggtggagtggcggcgcgccgagtcggaacgctcggcgccggtgggccggttc
gggttcggccgcaggcccgcggccaccgaccgcggcagctggaacgtccccaaggccgcg
ctcaaggcgtcgatctccctcgatgtcggcgaccgggtcaaccacgacaagtacggcctc
ggcacggtcgtcgagtccgacaaggccacccagcgggtgctgatcgacttcggtagcgcg
ggcacggtgcggctgatgctcatcggtggggtgccgctacaaaagctgtga
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