Pseudonocardia sp. DSM 110487: K1T35_43075
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Entry
K1T35_43075 CDS
T10356
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psds Pseudonocardia sp. DSM 110487
Pathway
psds03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K1T35_43075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psds03021
]
K1T35_43075
03400 DNA repair and recombination proteins [BR:
psds03400
]
K1T35_43075
Enzymes [BR:
psds01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K1T35_43075
Transcription machinery [BR:
psds03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K1T35_43075
DNA repair and recombination proteins [BR:
psds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K1T35_43075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QYN35054
LinkDB
All DBs
Position
complement(9162554..9163600)
Genome browser
AA seq
348 aa
AA seq
DB search
MLISQRPSLAEESVVDTRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKELVVSSEEDEPVTMYLRKQGPGTVTAGDIVPPAGVTVHN
PDLHIATLNDKGRLEVELVVERGRGYVPAMQNKATGAEIGRIPVDSIYSPVMKVTYKVEA
TRVEQRTDFDKLVLDVETKPSITPRDALASAGKTLVELFGLARELNVDAEGIEIGPSPQE
ADTIAAFAMPIEELDLTVRSYNCLKREGIHTVGELVGRSEADLLDIRNFGAKSIDEVKMK
LVGLGLALKDSPPGFDPSAAAVEYGSDTPFDPDRFGDDGQDYAETEQL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcgcccctcactggccgaggaatcggtcgtcgacacccgttcccgg
ttcgtcatcgagccgctggagccgggcttcggctacacgctgggcaactcgctccggcgc
acgctgctctcctccatccccggtgccgccgtcacgagcatccgcatcgacggcgtcctg
cacgagttcaccaccgtgcctggggtcaaggaggacgtcaccgacatcatcctgaacctc
aaggagctcgtcgtgagctccgaggaggacgagccggtgaccatgtacctgcgcaagcag
ggccccggcaccgtcaccgctggcgacatcgtgccgcctgccggtgtcaccgtgcacaac
ccggacctgcacatcgccaccctgaacgacaagggccgcctcgaggtggagctcgtcgtc
gagcggggccgtggctacgtgccggccatgcagaacaaggccaccggcgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtcatgaaggtcacctacaaggtcgaggcc
acccgcgtcgagcagcgcaccgacttcgacaagctggtgctggacgtcgagaccaagccg
tcgatcaccccgcgggacgcgctggcctcggccggtaagaccctcgtggagctgttcggg
ctcgcccgcgagctcaacgtcgacgccgagggcatcgagatcggcccgtcgccgcaggag
gccgacaccatcgcggccttcgcgatgccgatcgaggagctggacctcaccgtccgctcc
tacaactgcctgaagcgcgagggcatccacacggtgggtgagctggtgggccgcagcgag
gccgacctgctcgacatccgcaacttcggtgccaagtcgatcgacgaggtcaagatgaag
ctcgtcggcctcggtctggccctgaaggacagcccgcccggattcgacccgtcggccgcc
gccgtcgagtacgggtccgacaccccgttcgaccccgaccgcttcggggacgacggccag
gactacgcagaaacggagcagctgtag
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