Pseudonocardia sp. DSM 110487: K1T35_43610
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Entry
K1T35_43610 CDS
T10356
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psds Pseudonocardia sp. DSM 110487
Pathway
psds00061
Fatty acid biosynthesis
psds00071
Fatty acid degradation
psds01100
Metabolic pathways
psds01212
Fatty acid metabolism
psds02024
Quorum sensing
psds04146
Peroxisome
Module
psds_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psds00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K1T35_43610
00071 Fatty acid degradation
K1T35_43610
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K1T35_43610
09145 Cellular community - prokaryotes
02024 Quorum sensing
K1T35_43610
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psds01004
]
K1T35_43610
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psds04147
]
K1T35_43610
Enzymes [BR:
psds01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K1T35_43610
Lipid biosynthesis proteins [BR:
psds01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K1T35_43610
Exosome [BR:
psds04147
]
Exosomal proteins
Exosomal proteins of breast milk
K1T35_43610
Exosomal proteins of breast cancer cells
K1T35_43610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QYN35151
LinkDB
All DBs
Position
9255903..9257561
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AA seq
552 aa
AA seq
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MDYPEVAVGAILAGSARRFGERTAVHYYGRELTFARLYTRAAAFAQALGGAGIGRGDVVA
LHLPNCPQYPIAYYGTLMAGATFSPANPLLPPDDLAAQLADCGAVAAVTWAPAAPALAAA
LPRTRIRLVLATDRAQALDPRTPAHVPGMQDFEAFHADAPQTPPDVPVDVYSDLAHLAYT
GGTTGRSKGVRLSHRNVVVNTLQSACWGSGSVPALDAHGDLVLDQVEPPEERPVRLGTGC
AVTVTPWFHAMGTIGGMNAPVLRGDALVLHDRFDPGAYLADAERFRVTTLGGAPPLFGGL
LRHPDFAARDLSSVRSITSGAAPMPLEMIEALRRRLGPDVVISEGYGLTEVTMVATQGPL
ACSAVRKPGTVGPPVYDTEIRIVDPASFDLTPLPAGEPGEVCIRGPQVMAGYKDRPEETA
AALVDGWLRTGDVGTLDEDGYLSIVDRKKDMLLYKGYNVYPRELEELLHMRPGVVGAAVV
GRPDPVAGELPVAFVVAPGLDAADATSLMEAVNAQVLPYKRLREVHLVDEIPVSAAGKVL
KRALRDRLTLQG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggactacccggaggtggcggtcggcgcgatcctcgcgggctcggcgcgccgcttcggg
gagcgcacggccgtgcactactacggccgggagctcacgttcgcgcggctctacacgcgg
gctgcagcgttcgcccaggcattgggcggcgcggggatcgggcgcggcgacgtcgtggcg
ctgcacctgccgaactgcccgcagtacccgatcgcgtactacggcacgctcatggcgggc
gccacgttctcgcccgccaacccgctgctcccgccggacgacctggccgcgcagctcgcc
gactgcggcgccgtcgccgccgtcacatgggcacccgccgcgcccgccctcgcggccgcg
ctgccgcgcacccggatccggctcgtgctggccaccgaccgcgcgcaggcgctcgacccg
cgcacaccggcccacgtgccgggcatgcaggacttcgaggcgttccacgccgacgctccg
cagaccccgcccgacgtcccggtcgacgtgtactccgacctcgcgcacctcgcctacacg
ggcggcaccaccggacgctcgaagggcgtgcggctctcgcatcgcaacgtcgtggtcaac
accctccagtccgcgtgctggggctccgggtccgtacccgccctcgacgcgcacggcgac
ctcgtgctcgaccaggtcgaaccgccggaggagcggccggtgcggctcggcaccgggtgc
gccgtcaccgtcaccccgtggttccacgccatggggacgatcggcggcatgaacgcgccc
gtgctgaggggcgacgcgctcgtgctgcacgaccggttcgacccgggcgcctacctcgcc
gacgccgagcggttccgcgtcacgacgctgggcggcgcccctccgctcttcggagggctg
ctgcggcaccccgacttcgccgcgagggacctctcgtcggttcggtcgatcacctcgggg
gccgctccgatgccgctggagatgatcgaggcgctgcgcaggcggctcgggccggatgtc
gtgatctcggagggatacggcctcaccgaggtcaccatggttgccacgcagggtccgctc
gcctgctcggcggtgcgcaagcccggcacggtcgggccgccggtgtacgacaccgagatc
cgcatcgtcgacccggcctcgttcgacctgacgccgctgcctgcgggcgagccgggcgag
gtgtgcatccgcggaccccaggtgatggccggctacaaggaccgccccgaggagacggca
gcggcgctcgtggacggttggctgcgcacgggcgacgtcggcaccctcgacgaggacggc
tacttgtcgatcgtcgaccgcaagaaggacatgctgctctacaaaggctacaacgtgtac
ccccgggagctggaggagctgctgcacatgcggccgggcgtggtgggggcagcggtcgtg
ggcagaccggacccggtggcgggcgagttgccggttgcgttcgtcgtggcgcccggtctc
gacgctgcggacgccacatcgctgatggaagcggtcaacgcgcaggtgctgccgtacaag
cggctgcgcgaggtgcacctcgtggacgagatcccggtctcggccgcgggcaaggtgctc
aagcgggcgctccgcgaccgcctgacgctgcagggttaa
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