KEGG   Pseudomonas sp. Stari2: NH234_00315
Entry
NH234_00315       CDS       T10554                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
psdt  Pseudomonas sp. Stari2
Pathway
psdt03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psdt00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NH234_00315
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psdt02044]
    NH234_00315
Secretion system [BR:psdt02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NH234_00315
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF2345 Phage_Mu_Gp45
Other DBs
NCBI-ProteinID: XCY00377
LinkDB
Position
complement(61190..63415)
AA seq 741 aa
MFNPANETHFSLTVEDYVGDLQVLSFTGTEGISQPFRFDLELVSENPDLDLEKLLHKQAF
LALDPQGSGIHGQIYRVAQGDAGKRLTRYKVSLVPQLQYLHHRTNQRIYQQMSAPKIIAL
ILDEHGIKGNAYSFQLSQPCPDRDYCVQYDETDLHFVQRLCEEEGIHYHFQHSQKGHLLV
FGDDQTVFPNLGQPTAYVQGSGMVAEEPVIKGFKLRLETRTSRTTRRDYDFEKPRLQMEA
AYKPDGESTEPDLEDYDYPGRFIDRARGKFLSQRALERHRADYRQAEGRSDQTRLVSGHF
MEMSDHPRSEWNDLWLLTEIFHEGKQPQVLEESVTSDTTDNKDDFHQGYRNTFLATPWDV
FYRPALEHPKPRVLGSQTAMVTGPKGEEIHCDQYGRIKVQFHWDREGQADDKTSCWLRVS
SSWAGDRYGAISIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENPVPYALPANKTRTVFKT
LSSPGGGGYNELRIEDKKGAEQIFIHAQRDWDENVEHDQKIRVGNERHDTVVKNSYTELK
AEEHRTTISDRKIEAKADDHLTVGESQHIKLGTAQLTSVGKEIHLKSGDKMVIEAGTELT
ILGGGSFIKLDGGGVTVVGPVVKINAGGSAGSGTGIGILAPVIPLIADQARAGNTLKSGT
ANSPKYDEQIRFVTGLGQPIKSVKAAIIVPSSVAPKISKSNTDGLHPRVVTDSEETAEVH
LMWDELIVPEGSDDYEASRNK
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgttcaacccagctaacgaaacgcacttcagcctgacggtcgaagactacgtaggcgac
ctgcaagtcctgtcgttcaccggcaccgaaggcatcagccagccgttccgtttcgacctg
gaactggtcagcgaaaacccggatctggacctggaaaaactcctgcacaaacaggcgttc
ctcgccctcgatccacaaggctcgggcatccacggccagatctaccgcgtcgcccagggc
gatgccggcaagcgcctgacccgctacaaggtttcgctggtgccgcagctgcaatacttg
catcaccgcaccaaccagcgcatctaccagcagatgtctgcgccgaaaatcatcgcgctg
atcctcgacgagcacggcatcaagggcaacgcctacagcttccagctgagccagccgtgc
ccggatcgcgattactgcgtgcagtacgacgaaaccgacctgcacttcgtccagcgtctg
tgcgaagaggaaggcattcactaccacttccagcacagccagaaaggccatctactggtg
ttcggcgatgaccagaccgtattcccgaacctcggccagccgaccgcgtacgtgcagggc
agcggcatggtcgccgaagagccggtgatcaaaggcttcaagctgcgcctggaaacccgc
accagccgcaccacccgccgcgactacgatttcgagaaaccgcgcctgcaaatggaagcc
gcgtacaaaccggacggcgagagcactgaaccggatctggaagactacgactaccccggc
cgcttcatcgaccgtgcgcgaggcaagttcctcagccagcgcgccctcgaacgtcaccgc
gccgactaccgtcaggccgaaggtcgcagcgaccagacccgactggtcagcggccacttc
atggaaatgtccgaccacccgcgcagcgagtggaacgacctgtggctgctcaccgaaatc
ttccacgaaggcaaacagccgcaagtcctcgaagaatcggtcaccagcgacaccaccgac
aacaaggacgacttccaccagggctaccgcaacaccttcctcgccaccccatgggacgtg
ttctaccgcccggccctcgagcacccgaaaccccgcgtgctcggcagccagaccgccatg
gtcaccggccccaaaggcgaagaaatccactgcgaccagtacggccgcatcaaggtgcaa
ttccactgggaccgtgaaggccaggccgacgacaaaaccagctgctggctgcgcgtctcc
agctcctgggccggcgaccgctacggcgccatctccatcccgcgcatcggcatggaagtc
ctcgtcaccttcctcgaaggcgaccccgaccagccactggtcaccggctgcctgtaccac
aaggaaaacccggtgccctacgccctcccggcaaacaaaacccgcaccgtcttcaaaacc
ctcagctccccgggcggcggtggctacaacgaactgcgcatcgaagacaaaaaaggcgcc
gaacaaatcttcatccacgcccagcgcgactgggatgaaaacgtcgaacacgaccagaaa
atccgcgtcgggaatgaacgtcacgacacggtggtgaagaacagctacaccgagctcaag
gcagaagaacaccgcaccaccataagcgaccgcaagatcgaagcgaaagccgacgatcac
ctgacggtaggagaaagccagcacatcaaactcggtaccgcccagttgaccagtgtgggg
aaagagatccacctgaagtctggcgacaagatggtgattgaggctggcaccgaactgacc
attctgggcggtgggagctttatcaagctcgatggcggtggtgtgacggtggttggaccg
gtggtgaagatcaatgccggaggctcggcaggaagcggtacgggaattggcattctggca
ccggtcattccgctgattgcggatcaggctagggcggggaacacactgaagtccggtact
gccaatagtccgaagtatgacgaacaaatccgttttgtgaccgggctcggtcaacccata
aagtctgtgaaggcagcgattattgtcccttcgtcggtcgctcctaaaatctccaaaagc
aacacagatggtctgcatccgcgtgtggtgactgacagcgaggaaaccgctgaggtccat
ctgatgtgggacgaactcatcgtgccggaaggctccgacgattacgaagcgagtagaaat
aaatga

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