Pseudomonas sp. Stari2: NH234_01090
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Entry
NH234_01090 CDS
T10554
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NH234_01090 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdt02000
]
NH234_01090 (choX)
Transporters [BR:
psdt02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
NH234_01090 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
XCY00526
LinkDB
All DBs
Position
complement(239214..240131)
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AA seq
305 aa
AA seq
DB search
MVKLSTVVTVSLLALGSASAFAESCDTVKMADPGWSDIAATNAITGFLLDGMGYKAKVDT
LAVPITFGGLKDGQVDVFLGNWMPAQQGFYDKFVATGDVTQLAKNLDGTEFTLAVPDYVW
DAGVHNFADLNKFADKFERKIYGIGSGAPANISLQEIIKKNDFDMGQWKLIESSEQAMLA
EVSRAVKKQKFVTFLGWTPHPMNVQLKMHYLKGGEKYFGDTGSVYTLTRKGYAEACPNVG
KLLTNLSFTQEMENSIMAEVVNKKVSNADAVKAWIKANPGVLDKWLDGVKTVDGKDALPA
VKAKL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagttatccacagtcgtgacggtcagtctgctggcactgggcagcgcatccgcg
ttcgccgagagctgcgacacggtgaaaatggccgatcccggctggagcgacatcgccgcg
accaatgccatcaccgggtttctgctggatggcatgggctacaaggccaaggtcgacacc
ctcgcggtgccaatcaccttcggtggtttgaaggacggccaggtcgacgtgttcctcggc
aactggatgccggcgcagcagggtttctacgacaagttcgtcgccaccggcgatgtcacg
cagctggcgaagaacctcgacggcaccgaattcaccctggccgtgccggattatgtgtgg
gatgcgggtgtgcataactttgctgacctgaacaaattcgccgacaagttcgagcgcaag
atctacggcatcggctccggcgcgccggcgaacatttcgctgcaagagatcatcaagaag
aacgacttcgacatgggccagtggaagctgatcgagtccagcgaacaggcgatgcttgcc
gaggtctcgcgggcggtgaagaaacagaaattcgtcaccttcctcggctggaccccgcac
ccgatgaacgtgcagctgaaaatgcattacctcaagggcggcgagaaatacttcggcgac
acgggcagcgtctacaccctgacccgcaagggctacgccgaggcctgtccgaatgtgggt
aaattgctgaccaatctttcgttcactcaggagatggagaacagcatcatggctgaggtg
gtgaacaagaaggtcagcaatgcggatgcggtgaaggcttggatcaaggcaaatccgggg
gtgttggataagtggcttgatggtgtgaaaaccgtggacggcaaagatgcgttgccggcc
gtaaaagccaaactgtaa
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