Pseudomonas sp. Stari2: NH234_01240
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Entry
NH234_01240 CDS
T10554
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt03030
DNA replication
psdt03410
Base excision repair
psdt03420
Nucleotide excision repair
psdt03440
Homologous recombination
Brite
Enzymes [BR:
psdt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NH234_01240 (polA)
DNA replication proteins [BR:
psdt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NH234_01240 (polA)
DNA repair and recombination proteins [BR:
psdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NH234_01240 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NH234_01240 (polA)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCY00555
LinkDB
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Position
complement(270972..273776)
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AA seq
934 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVKALGFPLLCVEGVEADDVIGTLAR
SSAAANRPVIISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAHLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDIGLDDLQMGPEDPAKLLELYTLLEFKSWINDLERDAKRLELSS
AAAPEPAVDLFNAPAEEAPAAPTEAAYETILDQARFDVWLEKLKNAKLFAFDTETTGVDA
QQAQLVGLSFAVQANEAAYIPLTHSYIGVPEQLDRDTVLRALKPILEDPNKLKVGQHAKF
DINILANCAIGGDQNEGITVRGIAFDTMLESYVLNSTATRHDMDSLAQKYLDHTTVSFQD
IAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQTLFEKLSAIPSLASVLTDIEIPLVP
VLARIERQGAFVDAALLGVQSIELGDKMVALEREAFEIAGEEFNLGSPKQLGVILYEKLG
LPVLKKTAKGQPSTAEEVLAKLAEDDHRLPKVLMEHRSMSKLKSTYTDRLPEQINPRTGR
IHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIM
AHLSRDEGLMNAFRNNLDVHTATAAEVFKAKLNEVTSDQRRGAKAINFGLIYGMGAQKLG
KDIGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAADQGYVETIFGRRLYLPDINSNKPQ
ERAAAERTAINAPMQGTAADIIKKAMVAVDNWLSVSGLDAKVILQVHDELVLEVREDLVD
QVRDEIRVHMSEAAKLDVPLLVEVGVGNNWDEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcttacctttaccgcgcttttcac
gcgctgccaccgctgaccacctccaaaggcatgccgaccggtgcggtcaaaggcgtgttg
aacatgctcaagagcttgcgcaaacagtatccggacagcccgttcgccgtggtgttcgac
gccaagggcgggacatttcgcgatgagatgtacgccgagtacaaggccaaccgcccaagc
atgcccgacgacatgcgcctgcagatcgagccgctgcaccagagcgtgaaagccctcggc
ttcccgctgctgtgcgtcgaaggcgtcgaggccgatgacgtgatcggcaccctggcccgc
agcagcgcggccgccaatcgtccggtgatcatttccaccggcgacaaggacatggcgcaa
ctggtcgacggtcacattaccttggtcaacaccatgtccggtagctcgatggatgtggag
ggcgtgaaggagaaattcggcgtcgctccggagcagatcatcgattatctcgccctgatg
ggcgactcttccgacaacatccccggtgttcccggcatcgggccgaaaaccgcttccggc
ctgctggtcggcgtcaacggcggcctgaccgagctctatgcgcacctcgacatcgtgccg
accctgccgattcgcggcgccaagaccctgccggccaaactcgaagagcacaaggagatg
gcattcctctcctatcaactggcgaccatcaaggtcgacgtgccactggacatcggcctc
gacgacctgcaaatgggcccggaagatccggccaagctgcttgagctttacaccctgctg
gagttcaagagctggatcaacgacctggagcgcgatgccaagcgtctggagctgagcagc
gccgctgcaccggaaccggccgtcgatctgttcaacgcacccgctgaggaagcgcctgcc
gctccgactgaagccgcgtacgagaccatcctcgatcaggcccgcttcgacgtctggctg
gaaaaactcaagaacgccaagctgtttgccttcgacaccgaaaccaccggcgtcgacgcg
caacaagcgcaactggtcggtctgtccttcgcggtgcaagccaacgaagcggcctacatc
ccgctgacccactcctacatcggcgtgccggagcaactggatcgcgacaccgtgctgcgc
gcgctcaagccgatcctggaagacccgaacaaactcaaggtcggccagcacgccaagttc
gacatcaacatcctggccaactgcgccatcggtggcgaccagaacgaaggcatcaccgtg
cgcgggattgccttcgacacgatgcttgagtcctacgtgctcaactccaccgccacccgc
cacgacatggacagcctggcgcagaagtacctggatcacaccaccgtgagtttccaggac
atcgccggcaaaggcgccaagcaactgaccttcgaccagatcgcgctggagcaggccgga
ccgtacgccgccgaagatgccgacgtgaccctgcgcctgcaccagacgctgtttgaaaag
ctcagcgccatcccgagcctggccagcgtgctgaccgacatcgagattccgctggtgccg
gtactggcgcgcatcgagcgtcagggtgcgttcgttgacgcggcactgctcggcgttcag
agcatcgagctgggcgacaagatggttgcgctggagcgtgaagccttcgaaattgccggt
gaagaattcaacttgggttcaccgaagcaactgggcgtgatcctctacgaaaaactcggc
ctgccggtgctgaagaaaaccgccaagggccagccgtccactgccgaagaagtcctggca
aaactggccgaagacgatcaccgcctgccgaaagtgctgatggaacaccgctccatgagc
aagctgaaaagcacctacaccgatcgcctgccggagcagatcaacccgcgtaccgggcgc
attcacacctcgtaccatcaggcggtggcatcgaccggccgcttgtcgtcgagcgatccg
aacctgcagaacattccggtgcgtaccgctgaaggccgacgcatccgtcaggcctttgtc
gcgccgaaaggctacaaactgctggcggcggactactcgcagatcgaattgcggatcatg
gcgcacctgtcccgcgacgaagggctgatgaacgccttccgcaacaacctggacgtgcac
accgccactgcggcggaagtgttcaaggccaaactgaacgaagtgacgtccgaccagcgc
cgtggcgccaaggcgatcaacttcggcctgatctacggcatgggtgcgcagaagctgggc
aaggacatcggcgtcgacaccaagaccgccaaggcctacatcgacacctacttcgcgcgc
taccccggcgttcgtgaatacatggatcgcacccgcgcgcaggctgcagatcaaggctac
gtggaaacgattttcggccgccgtctgtacctgccggacatcaactccaacaagccacag
gaacgagctgccgctgaacgcacggcgatcaacgcgccgatgcagggcaccgcagctgac
atcatcaagaaagccatggtggcggtggacaactggctgagcgtttccgggctggacgcc
aaagtcatcctgcaggtgcacgacgaactggtgctggaggttcgtgaggatctggtcgat
caggttcgcgacgaaattcgcgtgcacatgagcgaagcggcgaagctggatgtgccgttg
ctggtggaagtgggagtcggcaacaactgggacgaggcgcactga
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