Pseudomonas sp. Stari2: NH234_01650
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Entry
NH234_01650 CDS
T10554
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NH234_01650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdt02000
]
NH234_01650
02044 Secretion system [BR:
psdt02044
]
NH234_01650
Transporters [BR:
psdt02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NH234_01650
Secretion system [BR:
psdt02044
]
Type I secretion system
Adhesin protein transporter
NH234_01650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
MMR_HSR1
DUF87
AAA_29
Peptidase_C39
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
XCY00631
LinkDB
All DBs
Position
372019..374175
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AA seq
718 aa
AA seq
DB search
MESEVSRVHLSHDPRALHDDPLLDGLLALCMLHQKPASAAMLTTGLPLPKQRLSVELLPR
AAARAGLQGRVLQRKLEEIPAIAMPALLLLKDGRSAVLLGWQGENEARVLLSETDGGESL
VNRELLADDYLGKVFFAQPQHKFDVNHGTLIPRARSWFRDTLKRSRWLYADAIAASFLIN
IIAMAAPLFVMNVYDRVVPNQAEATLWVLALGITGAYLFDLILKSLRSLCLDLAGKKTDL
IISATLFERIVGMAMKYRPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTILIFIVI
AILGGHLVWIPVLAFPIALLIGYALQKPLVATMERTMALGAERQSSLIETLAGLDAVKVN
NAESERQYQWEQTIGTLSRLELRVKMLSGLAMNITLLIQQLAGVIMIVFGVYQIIAGNLS
MGGLIACYMLSGRALSPLASLSGLLTRYQQARVTMASVDQMMELPQERNFEERPLSRKVL
QGAIECRQLNFTYPDQQNPALKNINLVIRPGEKIGIIGRSGSGKSSLAKLLVGLYQPDDG
ALLVDGVDIRQIDVSELRYNIGYVPQDIQLLAGTLRDNLISGARYVEDELVLQAAELAGV
HEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPPILLLDEPTSAMDNTGEERL
KQRLAAVVENKTVVLVTHRASLLSLVDRLLVVDRGQILADGPKAAVMEALKKGQISVA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggaatcagaagtcagtcgagttcatctcagtcatgatccacgcgcgttgcacgacgat
ccgttactggatggtctgctcgccctttgcatgctgcaccagaaacccgccagcgcggcg
atgctgaccaccggtctgccgctgcccaagcaacgtctgagtgtcgagctgctgccccgt
gccgccgcgcgcgccgggcttcaggggcgggtgctgcaacgcaagctggaagaaattccg
gccatcgccatgccggcgctgttgctgctcaaggatggacgcagcgctgtcctgctgggc
tggcagggagagaacgaagccagggtgctgctcagcgaaaccgatggcggcgagtccctg
gtcaaccgtgagctgctggccgacgactacctcggcaaagtgttcttcgcccaaccccag
cacaaattcgacgtcaaccatggcacgctgatcccgcgtgcgcgctcgtggtttcgcgac
accctcaagcgttcgcgctggctgtacgccgacgccatcgccgccagtttcctgatcaac
atcatcgccatggcagccccgctgttcgtgatgaacgtctacgaccgggtggtgccgaac
caggccgaagcgaccctgtgggtacttgcactgggcatcaccggcgcctatctgttcgac
ctgatcctcaagagcctgcgcagcctgtgcctggatctggccggcaagaaaaccgacctg
atcatctccgccacgctgttcgaacgcatcgtcggcatggccatgaaataccggccggcg
cgggtcggcagctttgcccagaacattcacgagttccagagcctgcgcgacttcctcgcc
tcgctgaccctgaccagcctgatcgacctgccgttcaccattctgatcttcatcgtcatc
gccattctcggtgggcatctggtgtggattccggtgctggccttcccgattgcgctgctg
atcggctacgcgttgcagaaaccgctggtggcaaccatggagcgcaccatggcgctcggt
gccgagcgtcagtcgagcctgatcgaaaccctcgccggcctcgacgcggtgaaggtcaac
aacgccgaaagcgaacgccaataccagtgggaacagaccattggcaccctcagccgcctc
gagctgcgggtgaagatgctctcgggtctggcgatgaacatcaccctgctgatccagcaa
ctggccggtgtgatcatgatcgtcttcggcgtgtaccagatcatcgccggcaacttgagc
atgggcggcctgatcgcctgctacatgctcagtggccgcgctcttagtccgctggcgtcg
ctgtccggtctgctgacccgctaccaacaggcgcgggtgaccatggcctcggtcgaccag
atgatggagctgccgcaggaacgcaatttcgaagaacgcccgctgagccgcaaggtgctg
caaggcgccattgaatgccgtcagctcaacttcacctacccggatcaacagaacccggcg
ctgaaaaacatcaacctggtgattcgtcccggcgagaagatcggcatcatcggccgcagc
ggctcaggcaagagctcgctggccaaactgctggtcggcctgtatcagccggacgacggc
gcgttgctggtggacggcgtcgacatccgccagatcgacgtcagcgagttgcgctacaac
atcggctacgtgccccaggacatccaactgctggccggcaccctgcgtgacaacctgatt
tccggcgcccgttacgtcgaggacgagctggtgctgcaagccgccgaactggctggtgtg
catgaattcgcccgcctgcacccgcagggttatgaactgcaagtcggcgagcgcgggcag
aacctgtccggcggtcagcgccagaacgtcgcgctggcccgggcgctgttgctcaatccg
ccgattctcttgctcgacgaaccgaccagcgccatggacaacaccggcgaagagcgtctc
aagcaacgcctcgcggcggtggtggaaaacaagaccgtggtgctggtgacgcaccgggca
tcgctgctgtcgctggtggatcgcctgctggtggtcgaccgtggacagattctcgccgat
ggcccgaaagccgccgtgatggaagcgttgaagaaggggcagatcagtgttgcttaa
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