Pseudomonas sp. Stari2: NH234_01770
Help
Entry
NH234_01770 CDS
T10554
Name
(GenBank) Ig-like domain-containing protein
Organism
psdt Pseudomonas sp. Stari2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_12
DUF4347
Big_5
Pilin_PilX
Motif
Other DBs
NCBI-ProteinID:
XCY00654
LinkDB
All DBs
Position
400122..406505
Genome browser
AA seq
2127 aa
AA seq
DB search
MWWSKQKSRVTEGQRTLAAPLIMSLEPRMLFDGAVAATVADTAAAQPDSHPTADAAKAPT
ADHPVASKDTHGQADATPAASPVAVPGQTVVFVDARVKDADSLLKGIAPGTQVVKLDASK
DGLQQIAEYLDQHSGVSSVQIIAHGNAGDLWLGNSYLSADNVAQRSAVLAEIGKDMNVGG
DILIYGCYTAEGDRGLSFVDSLAQLTGRDVAASNNRTGVGGDWDLEIATGKIESANVLSA
LSMSEYQWGLATWTATNNANTGVGSLRAALASAQNGDIVTFSTGMTVQLTSELLINKNIT
VDGDLNNDGVADVTLDGQYKTRVVEITSGSTVTLDGLVITRGLVSGNGGNGGYGATGAMG
GGIFNAGILTLNNVSVTGNAAAGGGGGGGVTGANYGGGGGGGGGLGGQGGGHGGTAGPGT
GTLGGQAGSGGVGGYGGGYDATHMGGRGGSTIGGAGGVGVSYYSNGGNGGTANNGTISIG
GGGGGSGWDKVGGVGGNAAGGIYNASTGTLKIVGTSVISNNIGAGGGGGGGSGQGSNNLN
GGDGGRGVGAIWNQGGTVLITASNFSAISGNAAGSGSGGSELGGGVTGSVPLAFAAIYNN
GGTLNTAYVEPPTATIVMSDTALKIGETSLVTITFSRAVTGFTNADLTIANGTLTSVSSS
DGGLTWTATFTPTNNITDATNLITLDNTGVTAISDGVAGVGTTSSVNYAIDTARPTVTIV
MSDTALKIGDTSLVTFTFSEAVTGFTNADLTIANGTLSAVSSSDGGITWTGTFTPTASIT
DTTNLISLDNTGIADLAGNAGSGTTDSANYVIDTVRPTATIVVADSNLAAGETSLVTITF
SEAVSGFTTADLTVANGTLTGLSSSDGGITWTATLTPTTNITDTTNLITLDNTGVVDLAG
NAGSGTTNSNNYAIDTARPTATIVVADNNLKIGETSLVTITFSEAVTGFTNADLTIANGT
LTAVSSSDGGITWTATFTPTASITDATNLITLNNTGIADLNGNTGVGTTDSNNYAIDTQR
PTATIVLSDNALKIGETSVVTITFSEAVTGFTNADLTIANGTLSAVSSSDGGITWTATFT
PTSNITDATNVITLDQTGVSDLSGNAGSGTVDSGNYAIDTQRPTATIVVADSTLTAGETT
LVTFTFSEAVTGFSNADIVVANGTLTAVSSSDGGITWTATFTPSVGVNDATNLITLANTG
ITDLAGNAGSGTTNSNNYTIDTVVPTATIIISDNSLKIGETSLVTITFSEAVTGFTNADL
TIANGTLSAVSSSDGGITWTATFTPTSNVTDATNLITLDNSGVQNLSGNAGSGTTDSNNY
SIDTQRPTATIVVADTALGVGQTSLVTITFSEAVTGFTNADLTIANGTLSAVSSSDGGIT
WTATFTPAAGITDTTNVITLDNTGIADLAGNAGSGTTDSNNYAVDSQRPTATIVMSDSDL
RPGETAQVTITFSEAVTGFDNSDLSVANGTLSNVTSSDGGITWTATFTPNIGITDLTNLI
VLNNTGIADLAGNTGTGTTSSANYQIQTQVPTATIVVADTSLRAGETSLVTITFSEAVSG
FDNSDLTIANGTLGNVSSSDGGITWTATFTPTANITDATNLITLNNAGVANLSGNSGVGT
TDSNNFAIDTALPTATIVVADNRLGIGETTTVTITFSEAVSGFDLSDISVANGALSNLTS
NDGGKTWTATLTPTANVNDATNLILIDTAGVQDLAGNAGASVAISNNYILDATRPTVNIV
VANPHLGIGQSTMVTFTFSEAVSNFDLSDLSVTNGDLSNLTSNDGGKTWTATFTPTANVT
DPSNFIALDTSNVTDLAGNAGSTVAVSNNYTLDSERPTATVVVASPNLGVGQTSQVIITF
NEVVTGFDLSDLSVANGTLSNLSSSDGGKTWTATLTPNANVNSVSNAISVNSAGVSDLSG
NSGSGVSQSGNYVINTVPAAPPTSPLVVVSPDPEFRIDVPVVAPPLPDVPLQPIIFAPPT
GDLGSPLTFPPLFEQRVIGNGIRPLGDIFINHGALSPSFIAQVFTSSDSGGDGSGHGFLG
FGGGDGGVFGISTLSSLFNQNSEAERDSLNAFDSHSIRGGDVSQGLRGVFGAPTLGQQLQ
EIKDSEQHRVDSLAAALQQVGISEMPA
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggagcaagcaaaagtcgcgggtaaccgagggccaacggacgctggctgcgccg
ctgatcatgtcgctggagccgcgcatgctgttcgacggtgctgtcgcggccactgtggcc
gataccgctgcggcccagcccgacagccatcccactgccgatgccgccaaggcgccgacc
gccgatcatccggtggcgagcaaggacacccacggccaggccgatgccacgccggctgcc
agtcctgtcgccgtgccgggccagaccgtggtgtttgtcgatgcccgggtcaaggatgcc
gacagcctgctgaaaggcatcgctcccggcacgcaagtggtcaaactcgacgcgagcaag
gacggcttgcagcagatcgccgagtatctcgaccagcactcgggcgtcagttcggtgcag
atcatcgcccacggcaacgccggtgacttgtggctcggcaacagttacctgtcggcggac
aacgtcgcgcagcgcagcgcggtattggcggaaatcggcaaggacatgaacgtcggtggc
gacatcctcatttacggctgctacaccgccgagggtgaccgtggcctgagctttgtcgac
tcgctggcgcaactgactggccgcgacgtggcggcgtcgaacaaccgcaccggtgtgggc
ggcgactgggatctggagatcgccacgggcaagatcgagagcgccaacgtgctgtcggcc
ctgtcgatgagcgaataccaatggggcctcgccacctggaccgccaccaacaacgcgaac
accggggtcggctcgctgcgggcagcgctggcgtcggcgcaaaacggcgacatcgtgacc
ttcagcaccggcatgacggtgcagctcacctcggaattgctgatcaacaagaacatcacc
gtcgatggcgacctgaacaatgacggcgtcgccgatgtcaccctcgacggccagtacaag
acccgggtggtggaaatcacttccggcagcaccgtgaccctcgacggtctggtgattacc
cggggcctggtttcgggcaacggcggcaatggcggctacggcgcgaccggggccatgggc
ggcgggattttcaacgccggcatcctcacgctgaacaacgtttcggtcaccggcaacgcg
gcagcgggcggtggcggcggcggtggtgtcacgggcgccaactacggcggcggtggtggc
ggtggcggtggcctcggcggtcagggtggcggtcatggcggtacggccgggccgggcacc
ggtacgctgggcggccaggccggcagcggcggtgtcggtggctacggcggtggctacgac
gcgacgcacatgggcggtcgtggcggatccaccatcggcggcgccggtggtgtcggcgtg
tcctattacagcaacggcggcaatggcggcactgcgaacaacggcacgatttccattggc
ggcggcggtggcggctccggctgggacaaggtcggcggcgtcggcggcaacgcggccggc
ggcatttacaacgcttccaccggcaccctgaaaatcgtcggcacctcggtcatcagcaac
aacatcggcgcgggcggcggtggcggcggcggcagtggccagggcagcaacaacctcaat
ggcggcgacggcgggcggggtgtcggcgcgatctggaaccagggcggcacggtactgatc
acggcctccaacttcagtgccatcagcggtaatgcggcgggcagcggctccggcggctca
gagctgggcggcggcgtgacgggctctgtacctttggcttttgcagcgatctacaacaac
ggcggcaccctcaacaccgcttatgtggagccaccgaccgccaccatcgtgatgtccgat
accgcgctgaaaatcggcgaaacctcgctggtgaccatcaccttcagccgcgcagtgacc
ggtttcaccaatgccgacctgaccatcgccaacgggacgctgacatcggtcagcagcagc
gacggcggcctgacctggaccgcgaccttcactccgaccaacaacatcaccgacgccact
aacctgatcactctcgacaacaccggggtgaccgcgatcagcgacggcgtggcgggtgtc
ggcacgaccagttccgtcaactacgcgatcgataccgcacggccgaccgtgaccatcgtg
atgtccgacacggcgttgaagatcggcgatacctcgcttgtgaccttcacgttcagcgaa
gcggtgaccggtttcaccaacgccgacctgaccatcgccaatggcacgctgagcgcagtc
agcagcagcgacggcggcattacctggaccgggacgttcaccccgactgcgagcatcacc
gacaccaccaacctgatctccctggacaacaccggtatcgccgacctggccggcaacgcc
ggcagtggcaccacggattcggccaactacgtgatcgataccgtgcggccgaccgcgacc
attgtcgtcgccgacagcaatctggcagcgggcgaaacctcgctggtgaccattaccttc
agcgaagcggtcagcggcttcaccaccgccgacctgacggtggccaacggcaccctgact
ggcctgagcagcagcgatggcggcatcacctggaccgccacgctcacgcctaccaccaac
attaccgacaccaccaacctgattaccctggacaacaccggggtcgtcgatctggccggt
aacgccggcagcggcaccaccaactccaacaactacgccatcgacaccgcgcgtccgacc
gcgaccatcgtggtggccgacaacaacctgaagatcggcgaaacctcactggtgaccatc
accttcagcgaagcggtgaccggtttcaccaacgccgacctgaccatcgccaacggcacc
ttgacggcggtcagcagcagcgacggtggcatcacctggacggccacgttcacgccgacc
gccagcatcactgacgcgaccaacctgatcaccctgaacaataccggcatcgctgacctg
aacggcaacactggcgtcggcaccactgattcgaacaattacgcgatcgacactcagcgt
ccgactgcgaccattgtcttgtccgacaacgcgctgaaaatcggcgaaacctcggtagtg
accatcaccttcagcgaagcggtcaccggtttcaccaacgccgacctgacgattgccaac
ggcacgttgagcgcggtgagcagcagcgacggcggtatcacctggacggcgacattcaca
ccgaccagcaacatcaccgacgccaccaacgtcatcaccctggaccagaccggcgtctcg
gatctgtccggcaacgccggcagcggtactgtcgattccggcaactacgccatcgatacc
cagcgtccgaccgccaccatcgtggtcgccgacagcaccctcacggccggcgaaacgacc
ctcgtgaccttcaccttcagtgaagcggtgaccggcttcagcaacgctgacatcgtggtt
gccaacggcaccctgacggcggtcagcagcagcgatggtggcatcacctggacagctacg
ttcacgccgagcgtgggcgtcaacgacgcgaccaatctgatcaccctggccaacaccggt
atcaccgacctggccggcaacgccggcagcggcacgaccaactccaacaactacaccatc
gacaccgtggtgccgactgccaccatcatcatttccgacaactcactgaaaatcggcgag
acctcgctggtgactatcaccttcagtgaagcggtgactggtttcaccaacgccgacctg
accatcgccaacggcacgttgtcggcagtcagcagcagcgacggcggcatcacctggacg
gcaaccttcacgccgaccagcaacgtcaccgacgccaccaacctgatcacgctggacaat
tcaggggttcaaaacctttcgggcaacgccggcagcggcaccaccgattcgaacaactat
tcaatcgacactcagcgtccgaccgcgaccatcgtggtcgccgacaccgcgctcggcgtc
ggccagacgtcgctggtgaccatcacgttcagcgaagcggtgaccggtttcaccaacgcc
gacctgaccatcgccaacggtacgctgagcgcagtgagcagcagcgatggcggcatcacc
tggactgccacgtttactccggcggcaggaattaccgacaccaccaacgtcatcaccctg
gacaacaccggcattgccgacctggcgggcaacgccggcagcggcaccaccgattccaac
aactatgcagtcgacagtcagcggccgacggcgaccattgtcatgagtgacagtgatctg
cgccctggcgaaaccgcccaggtgaccatcactttcagcgaggccgtgaccggattcgac
aattccgacctgagcgtcgccaatggcaccttgagcaacgtcacgtccagcgacggcggc
atcacctggacagccacgttcacgccgaacatcggcatcaccgacctcaccaacctgatt
gtcctgaacaacaccggcatcgccgacctggccggcaacaccggcaccggcaccaccagt
tcggccaactatcagatccagacccaggtaccgaccgcgaccattgtggttgccgatacc
tcactcagggccggggaaacctcgctggtgaccatcaccttcagcgaagcggtgagcggt
ttcgacaacagtgacctgaccatcgccaacggcacgttgggcaatgtcagcagcagcgac
ggcggtatcacctggaccgcgaccttcacgccgacggccaatatcaccgatgccaccaac
ctgatcaccctgaacaacgccggggtggccaacctgtcgggcaacagtggcgtcggcacg
accgattccaacaacttcgccatcgacaccgcgctgccgactgccaccatcgtggtcgcc
gacaatcgtctcggcatcggtgaaaccaccaccgtgaccatcaccttcagcgaagcggtg
agcgggttcgatctgtccgacatcagcgtcgccaacggcgcgttgtcgaacctgaccagt
aacgacggcggcaagacctggaccgcgaccctcacaccaacggccaacgtcaacgatgcg
accaacctgatcctgatcgacaccgccggtgtccaggatctggccggcaacgccggggcg
agcgttgctatctccaacaactacatcctcgatgcgacccggccgacggtgaacatcgtg
gtcgccaacccacatctgggcatcggtcagagcaccatggtgactttcactttcagcgag
gcagtgagcaatttcgacctgtccgacctgagcgtgactaacggtgacctgagcaacctg
accagcaacgacggcggcaagacctggacggcgaccttcacgccgaccgcgaatgtcacc
gatccaagcaacttcattgccctggacaccagcaacgtcaccgacctggcgggcaatgcc
ggcagcacggtggcggtgtcgaacaactacaccctcgacagtgagcggccgaccgccacg
gtggtggtcgccagtccgaacctgggcgtcggtcagacctcgcaagtgatcatcaccttc
aacgaagtggtgaccggtttcgatctgtcggatctgagcgtagccaacggcactttgtcc
aacctgagcagcagcgacggtggcaagacctggaccgcgaccctgacgccgaatgccaac
gtcaacagcgtcagcaatgcgatcagtgtcaacagcgccggggtcagcgacctgtccggc
aatagcggtagtggagtcagtcagtccggcaactatgtgatcaatacggtgccggccgca
cctccgacatcaccgctggtggtggtatcaccggatccggagttccgcatcgacgttccg
gtcgttgcgccgccgctgcccgatgtgccgctgcaaccgatcatctttgcgccacccacc
ggcgatctcggttcaccgctgaccttcccgccgttgtttgagcagcgggtgatcggcaat
ggcatccgtccgctgggcgatattttcatcaaccacggcgcgttgagcccaagctttatt
gctcaggtgttcaccagcagcgacagcggtggtgatggatccggtcacggcttcctcggt
ttcggtggtggtgatggcggggtgttcggtatcagcaccttatccagtctgttcaaccag
aacagtgaggcagagcgggattcactgaacgccttcgacagccactcgattcggggtggc
gacgtatcccaaggcctgcgcggcgtattcggcgcgccgaccctgggccagcaactgcaa
gagatcaaagacagcgagcagcaccgggtggatagcctggcggcggctctgcaacaggtc
ggcatcagcgaaatgccggcctga
DBGET
integrated database retrieval system
