Pseudomonas sp. Stari2: NH234_03990
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Entry
NH234_03990 CDS
T10554
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
psdt Pseudomonas sp. Stari2
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psdt03000
]
NH234_03990 (fis)
03036 Chromosome and associated proteins [BR:
psdt03036
]
NH234_03990 (fis)
03400 DNA repair and recombination proteins [BR:
psdt03400
]
NH234_03990 (fis)
Transcription factors [BR:
psdt03000
]
Prokaryotic type
Helix-turn-helix
Other families
NH234_03990 (fis)
Chromosome and associated proteins [BR:
psdt03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
NH234_03990 (fis)
DNA repair and recombination proteins [BR:
psdt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NH234_03990 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
DUF6507
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
XCY01085
LinkDB
All DBs
Position
complement(905356..905676)
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AA seq
106 aa
AA seq
DB search
MTMMTETLVSGTTPVSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHLEGAAVTDVYN
LVLSEVEAPLLESVMNYVKGNQTKASELLGLNRGTLRKKLKQYDLL
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatgaccgagactttagtgagtggaacaacacccgtgagcgacaacgtgaat
ttgaaacagcacctcaataccccgagcgaagaaggccagacccttcgcgggagtgtcgag
aaggcgctgcacaattatttcgcccaccttgagggcgcagccgtcacggatgtgtacaac
ctggtgctctccgaagtcgaggctcccctgctcgaaagcgtgatgaactacgtcaagggc
aaccagaccaaggccagcgagctgctcggactcaatcgcggcacgctgcgcaagaaactc
aagcagtacgatctgctgtaa
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