Pseudomonas sp. Stari2: NH234_04845
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Entry
NH234_04845 CDS
T10554
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psdt Pseudomonas sp. Stari2
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psdt03016
]
NH234_04845 (truB)
Enzymes [BR:
psdt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NH234_04845 (truB)
Transfer RNA biogenesis [BR:
psdt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NH234_04845 (truB)
Prokaryotic type
NH234_04845 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
XCY01244
LinkDB
All DBs
Position
1096266..1097183
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGQADIEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLQDWPLLQFSEASAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccg
ctggggttcacttccaacgccgcgttgcagaaggttcgctggctactcaatgccgagaag
gccggccacaccggcagtctcgacccgctggccaccggcgttctgccgttgtgctttggc
gaggcgaccaagttctcgcagtatctgctcgattccgacaagggttacgaaaccctggcg
caactgggcaagaccaccaccacggcagacgccgaaggcgaggttttgcaggagcgtccg
gtgaccgttggtcaggccgacattgaagcggtcctgccgaaatttcgcgggcaaatcagt
cagataccgccgatgtactcggctctcaagcgtgatgggcagccgctgtacaagctggcc
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctggccttcgaaggcgatactgcgcgtcttgcggtggattgcagcaagggcacctatatt
cgtaccctggtggaggatatcggtgagcaactcggttgtggtgcgtacgtcgctgaactg
cgtcgtacccaggccgggcctttcaccctggcgcagaccgtgaccctcgaagagctggaa
gcggtacatgccgaaggcggcaacgaagcggtcgaccgcttcctgatgccatcggacagc
ggcctgcaggattggccactgctgcagttctcggaagcgagcgcgttctactggctcaac
ggccagccggtacgtgccccggatgctccgaagttcggcatggtgcgggtacaggatcat
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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