Pseudomonas sp. Stari2: NH234_05310
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Entry
NH234_05310 CDS
T10554
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
psdt Pseudomonas sp. Stari2
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psdt03019
]
NH234_05310 (rapZ)
Messenger RNA biogenesis [BR:
psdt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NH234_05310 (rapZ)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_33
AAA_29
AAA_28
AAA_22
nSTAND_NTPase5
SKI
Motif
Other DBs
NCBI-ProteinID:
XCY01333
LinkDB
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Position
complement(1206173..1207030)
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AA seq
285 aa
AA seq
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MRLIIVSGRSGSGKSTALDVLEDNGYYCIDNLPAGLLPELAERALIHTELSQPLVAVSID
ARNLPSHLSRFPELLEEVRSRHIQCDVLYLDADEETLLKRFSETRRRHPLSSANRSLAEA
INDETALLGPIADLADLKVNTTNLNLYQLRDTIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRAQSGLDEPVAEYLAAQPEVEEMFQDIYTYLFKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQALQKTLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgatcatcgtcagtggccgctccggctcgggcaaaagtacggccctggatgtc
ctcgaggacaacggctactactgcatcgacaatctgccggccggcttgctgccggagctg
gcggaacgcgcactgattcatacggaactgtctcagccactggtcgcggtatcgatcgat
gcacgcaacctgccaagccatctttcgcgttttccggagttgcttgaggaagtccgcagc
cggcacatccagtgcgacgttctgtatctggatgccgatgaagaaaccctgctcaagcgt
ttctcggaaacccgtcgccgtcacccgctgagcagtgccaatcgttcgctggctgaagcc
atcaacgatgaaacagctctgctgggcccgatcgccgacctggccgatctgaaggtcaat
accaccaatctgaacctgtaccagttgcgcgacaccatcaagctgcgcctgctgaaccaa
ccggagccgggcaccgcgtttctggtggagtcgttcggtttcaaacgcggcatgccggtg
gatgcggatctggtgttcgatgtacgctgcctgcccaatccatactggaaaccggaacta
cgcgcgcaatcaggcctcgatgagccggtagccgagtacctggcggcacagccggaagtc
gaagagatgttccaggacatctatacgtatctgttcaaatggctgccgcgcttcgctgca
agcaatcgcgcctacgtcaccattgccattggatgcaccggcgggcatcaccgctccgtc
tacctgaccgaacgcctgggtcaggccctgcagaaaaccctgaagaacgtccaggttcgc
caccgcgacctcagctaa
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