Pseudomonas sp. Stari2: NH234_05980
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Entry
NH234_05980 CDS
T10554
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NH234_05980 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdt02000
]
NH234_05980 (lptF)
Transporters [BR:
psdt02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
NH234_05980 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
XCY01465
LinkDB
All DBs
Position
1346346..1347467
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AA seq
373 aa
AA seq
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MIVFRYLSREVLLTLSAVSAVLLVIIMSGRFIKYLAQAAAGQLDPGSLFLIMGYRLPGFM
QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLFRMTLFPATLVALVVAWLSLSL
APQGANQFQLLLNKQDALTEFDTLEPGRFQALRDGTRVTYTENLSDDRVNLGSVFISQKN
LGANQADRGISVLVAEKGRQEIRPDGNRYLILHNGYRYDGSPGLANYRAIHYETYGVLLP
KPDVSEEVTDRDAMPTSTLMASDDIRAKTELQWRLSLPLLVFIVTLMAVPLSRVNPRQGR
FLKLLPAILLYMAYLTILIAARGALEKGKIPASLGLWWVHGIFLVIGIGLLYWEPLRLKM
ASRRSAALEVARG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgtcttccgttatctgtcccgcgaagtcctgttgaccctgagtgcggtaagcgcc
gtgctgctggtcatcatcatgagcggtcgcttcatcaaataccttgcccaggccgctgcg
ggccagctcgatccgggatcgctgttcctgatcatgggctaccgtctgccgggcttcatg
cagttgatcctgccgctgggcctgttcctcgggatcctgctggcgtacggccggttgtat
ctcgaaagcgaaatgaccgtgctgtcggccactggcatgagccagcagcgcctgttccgc
atgacgctgttcccggccacgctggttgcactggtggttgcctggctgagcctgagcctc
gccccgcaaggcgccaatcagttccagctgctgctgaacaagcaggacgccctgaccgaa
ttcgacacccttgagcccggccgcttccaggcattgcgcgacggcacccgggtgacctac
accgaaaacctgagcgacgaccgggtcaacctgggcagcgtgttcatctcgcagaaaaac
ctcggtgccaatcaggcggatcgcgggatttccgtgctggtggccgaaaaaggacggcag
gaaatccgtcctgacggcaatcgctatctgatcctgcacaatggctaccgctacgacggc
agcccgggtctggccaactaccgtgccattcattacgaaacctatggcgtactgttgccc
aagcccgatgtcagcgaggaagtcaccgaccgtgacgccatgccgacgtcgaccttgatg
gccagcgatgacatccgcgccaagaccgaactgcaatggcgcctgtcgctgccgctgctg
gtatttatcgtgaccctgatggcggtgccgctgtcgcgggtcaatccgcgccaagggcgc
ttcctcaagctgctgccggcgattcttctttatatggcttacctgaccatcctgattgcc
gctcgcggcgccctcgaaaaaggcaagatcccggcgagtctggggctgtggtgggtacac
gggatcttcctggtcatcggtatcggcctgctgtactgggaaccgctgcgcctgaaaatg
gccagccgtcgcagcgctgcgctggaggtggctcgtggttaa
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