Pseudomonas sp. Stari2: NH234_06110
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Entry
NH234_06110 CDS
T10554
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt02024
Quorum sensing
psdt03060
Protein export
psdt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NH234_06110 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NH234_06110 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NH234_06110 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psdt02044
]
NH234_06110 (ffh)
Enzymes [BR:
psdt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NH234_06110 (ffh)
Secretion system [BR:
psdt02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NH234_06110 (ffh)
Eukaryotic Sec-SRP protein
NH234_06110 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
APS_kinase
AAA_33
YqeC
AAA_24
KTI12
AAA_31
ParA
nSTAND3
cobW
Thymidylate_kin
6PF2K
AAA_16
AAA_30
ABC_tran
AAA_5
Helicase_RecD
SLFN-g3_helicase
AAA_17
AAA_19
AAA_18
PaREP1
ATP_bind_1
NACHT
AAA_14
Motif
Other DBs
NCBI-ProteinID:
XCY01490
LinkDB
All DBs
Position
1377044..1378420
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLTERLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKIVQAELETLMGAANEDLNLSAVPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKSVMVVSADVYRPAAIKQLETLANDIGVTFFPSDLSQKPVDIANAAIKEAK
LKFIDVVIVDTAGRLHIDEEMMGEIKALHAAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKTEALDPFHPERIASRILGMGDV
LSLIEQAEATLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV
NLSQMGNAQNAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMLPGGGMPKM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacttaaccgaacgtctctcgcagacgctgcgccatgtcaccggcaaggcg
aagctgaccgaagacaacatcaaagacaccctgcgcgaagtgcgcatggcgttgctcgaa
gccgacgtcgccctgccggtggtcaaggacttcgtcaactcggtcaaggagcgcgctgtc
ggcaccgaggtgtcgcgcagcctgacgccgggtcaggcgttcgtgaagatcgtccaggcc
gaactcgaaaccctgatgggcgcggccaacgaagatttgaacctgagtgccgtgccgcca
gccgtcgtattgatggccggtctgcagggggccggtaaaaccactaccgccggcaagctg
gcgcgcttccttaaagagcgcaagaagaagtcggtcatggtcgtgtcggcggacgtctat
cgtcctgccgctatcaaacagctggaaaccctggccaacgacatcggcgtgacgttcttc
ccgtccgacctgagccagaaaccggtcgacatcgccaacgcggctattaaagaagcaaaa
ctgaaattcatcgacgtggtcatcgtcgataccgccggtcgtctgcacatcgatgaagag
atgatgggcgagatcaaggcgctgcacgccgcgatcaacccggtcgaaaccctgttcgtg
gtcgacgccatgaccggtcaggacgccgccaacacggccaaggcctttggcgatgcactg
ccgctgaccggtgtgatcctgaccaaggtcgacggtgacgcccgtgggggtgccgcgctg
tccgttcgtgccatcaccggcaaaccgatcaagttcatcggtatgggcgagaagaccgag
gccctcgatccgttccaccctgagcgtatcgcttcgcgaatcctcggcatgggcgacgtg
ctcagcctgatcgaacaggctgaagcgaccctcgacaaggacaaggccgacaagctggcc
aagaagctgaagaagggcaagggcttcgacctcgaagacttccgcgatcagctgcaacag
atgaagaacatgggcggcctcggcggcctcatggacaagctgccgagcatcggtggtgtg
aacctgtcgcagatgggcaatgcccagaacgccgcagagaagcaattcaaacagatggaa
gccatcatcaactccatgaccccggccgagcgccgcgaccctgagctgatcagcggttcg
cgcaagcgccggatcgccatgggttccggcacccaggtgcaggacatcggtcgcttgatc
aagcagcacaagcagatgcagaagatgatgaagaaattctccgccaagggcggaatggcg
aaaatgatgcgcggcatgggcggtatgttgcccggcggcggcatgccaaagatgtaa
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