Pseudomonas sp. Stari2: NH234_06615
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Entry
NH234_06615 CDS
T10554
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00541
Biosynthesis of various nucleotide sugars
psdt01100
Metabolic pathways
psdt01250
Biosynthesis of nucleotide sugars
Module
psdt_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NH234_06615 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psdt01005
]
NH234_06615 (kdsA)
Enzymes [BR:
psdt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NH234_06615 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
psdt01005
]
Lipid A
NH234_06615 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
XCY01585
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Position
1490787..1491632
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AA seq
281 aa
AA seq
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MAQKIIRVGDIEIANDKPMVLFGGMNVLESRDMAMQVCEEYVRVTEKLGIPYVFKASFDK
ANRSSVTSYRGPGLEEGMRIFQDIKQAFGVPIITDVHEPEQAAVVAEVCDIIQLPAFLSR
QTDLVVAMAKTNAVINIKKAQFLAPQEMKHILNKCVEAGNDQLILCERGSSFGYNNLVVD
MLGFGIMKQFEYPVFFDVTHSLQMPGGRSDSAGGRRAQVTDLAKAGMSQSLAGLFLEAHP
DPDNAKCDGPCALRLDKLEPFLAQLKALDELVKSFPTVETA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaagatcatccgcgtcggcgacatcgagattgccaacgacaaacccatggtg
ctgttcggtggcatgaacgtgctggaaagccgtgacatggccatgcaggtttgcgaagag
tatgtgagggtcaccgaaaaactcggtatcccttacgtgttcaaggccagcttcgacaag
gccaaccgttcttctgtgacctcctatcgcggtcctggcctggaagagggtatgcgcatc
ttccaggacatcaaacaagccttcggcgtaccgatcatcaccgacgtccacgagcctgaa
caggccgcggtcgtcgctgaggtctgcgacatcatccagttgccggccttcctgtcgcgc
cagaccgacctcgtggtcgctatggccaagaccaatgccgtcatcaatatcaaaaaagcc
cagttcctcgcgcctcaggaaatgaaacacatcctgaacaagtgcgtggaagcgggtaac
gatcaattgatcctctgcgagcgcggttcgagcttcggctacaacaacctcgtggtcgac
atgctcggcttcggcatcatgaagcagttcgagtacccggtattcttcgatgtgacccat
tcgctgcaaatgcctggcggtcgttccgactccgccggcggtcgccgcgcccaggtcacc
gacctggccaaggctggcatgagccagtcgctggcgggcctgttcctcgaagcccacccg
gatccggacaacgccaaatgcgacggcccttgtgccttgcgtctggacaaactggagcca
ttcctggcccagctcaaagccctggacgaactggtgaagagttttccgacggtagaaacc
gcgtaa
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