Pseudomonas sp. Stari2: NH234_07350
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Entry
NH234_07350 CDS
T10554
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psdt Pseudomonas sp. Stari2
Brite
Transcription machinery [BR:
psdt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NH234_07350 (rapA)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCY01723
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Position
complement(1625625..1628471)
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AA seq
948 aa
AA seq
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MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGETRQYALRNAPLTRVRFSPG
DSITHFEGWKMTVREVEDADGLLVYHGLNAENEAVTLPETQLSNFIQFRLASDRLFAGQI
DPLPWFSLRYHTLEHTSRQLQSALWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLEVALFDEERFIESDA
SNPFEDTQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEEKVSPEYSLVEQL
AETIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESENYRPVAEAVQELLDK
GRLSPAAHKTIHGFLGNEGEALLTAVNDGDSEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPDEYLELPLGDHAELYPEVSFQAQPDASEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHIIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEVDDGEWQTLIDEARTERERLE
AELHTGRDRLLELNSGGAGEGEALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSARVSF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEDKVIPRHAERVAEARRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRKQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagcagagcttggt
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctttacccggccactggc
gaaacccgccagtacgcgctaaggaatgcgcccctgacccgcgtgcgattctcgccgggc
gactccatcactcacttcgaaggctggaagatgaccgtgcgcgaagtcgaggatgccgat
ggcctgctcgtctaccacggcctgaacgccgagaacgaagccgtcaccctgccggaaacc
cagctgtcgaacttcattcagttccggttggccagcgaccgcctgttcgccgggcagatc
gacccactgccgtggttctccctgcgctaccacaccctggaacacaccagccgccagttg
cagtccgcgctgtggggcctgggcggcgtacgcgcacaaccgatcgcgcaccagttgcac
attgcccgtgaagtcgccgaccgcatcgccccacgggtattgctggcggacgaagtgggt
ctgggcaagaccatcgaagccggtctggtgatccatcgccaactgctgtcgggccgcgcc
agccgcgtgctgatcctggtgccggaaaacctccagcaccagtggctggtggaaatgcgc
cgccgcttcaaccttgaggtcgcgctgttcgacgaagaacgcttcatcgaaagcgatgcc
tccaacccgttcgaagacacccaactggccctcgtggccctggagtggctggtcgaagac
gaaaaggcccaggacgcgttgttcgccgccggctgggacctgatggtggtcgacgaagca
caccacctggtctggcacgaagaaaaagtcagcccggaatactccttggtcgaacagctt
gccgagacgatcccgggcgtgctgctgctcaccgccaccccggaacaactcggccaggac
agccacttcgcccgtctgcgcctgcttgacccgaaccgtttccacgacctggccgccttc
cgcgccgaaagcgagaactatcgcccggtggccgaagccgttcaggagctgctggacaag
ggtcgcctgtcgcctgccgcgcacaagaccatccacggcttcctcggcaacgaaggtgaa
gccctgctgaccgccgtcaacgatggcgacagcgaagccagcgcccgcctcgtgcgcgaa
ctgctcgaccgccacggcaccggccgcgtgctgttccgcaacacccgcgccgccgtgcag
ggtttcccggagcgcaagctgcacccgtacccactgccgtgcccggacgaatacctcgaa
ctgccactgggcgatcacgccgagctgtacccggaagtcagcttccaggcccagccggac
gccagcgaagaagaacgctggtggaaattcgatccgcgcgtcgagtggctgatcgatcag
ctgaaaatgctcaagcgcaccaaagtgctggtgatctgcgcccacgccgaaaccgcgatg
gacctggaagacgccctgcgcgtgcgctccggcatcccggccacggtgttccacgaaggc
atgaacatcctcgagcgagaccgcgccgccgcctacttcgccgacgaagagtttggcgcg
caggtgctgatctgctcggaaatcggcagtgaaggtcgtaacttccagttcgcccaccac
ctggtgctgttcgatctgccgtcgcacccggacctgctggaacagcggatcggtcgtctg
gaccggatcggccagaaacacatcatcgagctgcacgtgccgtacttggaaaccagcccg
caagaacgtctgttccagtggtatcacgaggcgctgaacgcgttcctcaatacctgcccg
accggcaacgccttgcagcatcagttcggcccgcgcctgcttccgctgctcgaagaggtt
gacgatggcgagtggcaaacgctgatcgacgaggcgcgcaccgagcgcgagcgtctggaa
gccgagctgcacaccggtcgcgaccgtctgctggagttgaactccggcggtgccggcgaa
ggtgaagcgctggtcgaggacatcctcgagcaagacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgcgttcggcatcgacagcgaagaccattcggaaaacgccctg
atcctcaagccgagcgagaagatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgcaaccaggcgctgtcgcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcagggcggcatggacctggtgctgtccggttcgatgggcaac
accgctgtcgcgctgatcaagaacaaggcgttgaagccaggcactgtgttgctggaactg
ctgtacgtcagcgaagtggttgcaccgcgctcgctgcaactgggccgttacctgccgccg
gccgccctgcgctgcctgctcgatgccaatggcaacgacctgtcggcccgtgtgtcgttc
gaaaccctgaacgatcaactggaaagcgtgccacgcgccagtgccaacaagttcatccag
gcccagcgcgatcagctgacgccacggatcaacgccggtgaagacaaggtcatcccgcgt
cacgccgagcgcgtggccgaggcccgccgtcgtctggcagccgataccgatgaagaactg
gcgcgcctgaccgcgttgcaagcggtcaacccgaccgtacgcgacagcgaactggttgcc
ctgcgcaaacagcgcgagcaaggcctggccatgctcgacaaggctgcgctgcgactcgaa
gcgatccgggtgctggtggcgggttaa
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