Pseudomonas sp. Stari2: NH234_08480
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Entry
NH234_08480 CDS
T10554
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psdt Pseudomonas sp. Stari2
Brite
Enzymes [BR:
psdt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NH234_08480
Ribosome biogenesis [BR:
psdt03009
]
Prokaryotic type
rRNA helicases
NH234_08480
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NCBI-ProteinID:
XCY01943
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Position
1837088..1838428
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AA seq
446 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM
LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIITADHNQHKEQIVNWLLAN
ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKAAAKTPTKRKSANR
PKPDSLVSSDGMAPLKRRKPAAPAAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagctgaaattt
gtcgagccaacgcctgtgcaagccgcggccattccgctggcgcttcaggggcgtgacctg
cgggtgacggcgcaaaccggtagcggcaagaccgccgcgtttgtcctgccgatcctcaac
cgcctgatcggtccggccaagatccgcgtcagcatcaagaccctgatcctgctgccgacc
cgcgagctggcccagcagaccctgaaggaagtcgagcgcttttcgcagttcactttcatc
aagtccggcctgatcaccggcggtgaagacttcaaggttcaggccgccatgctgcgcaag
gtgccggacatcctgatcggtacgccgggccggatgatcgagcaactgaacgccggcaac
ctggatctgaaagaagtcgaagtgctggtgctcgacgaagccgaccgcatgctcgacatg
ggatttgccgaagacgtgcagcgtctggtcgacgaatgcccgaaccgtcagcagaccatg
ctgttctccgccaccaccggcggttccggcctgcgcgagatgatcgccaaggtgctgaac
aaccctgagcacctgcagctcaacgcggtcagccagctgaacgacaccacccgtcagcag
atcatcaccgccgaccacaaccagcacaaagaacagattgtcaactggctgctggccaac
gagacctatcagaaggctatcgtcttcaccaacacccgggccatggccgaccgcatctac
ggtcgtctcgtcgcccaggaatacaaggcgttcgtgctgcacggcgagaaagaccagaag
gatcgcaaactggcgatcgaccgtctgaagcagggcggcgtgaagattctggtggccacc
gacgtggcggcccgtggtctggacgttgacggcctggatctggtgatcaacttcgacatg
ccacgcagcggcgacgaatacgtacaccgcatcggccgtaccggccgcgccggcaacgac
ggtctggcgatctcgctgatctgccacggcgactggaacctgatgtcgagcatcgagcgt
tatctgaagcaaagcttcgagcgccgcactatcaaggaagtcaaaggcacctacggcgga
ccgaaaaaggtcaaggcctcgggcaaggccgttggcgtgaagaagaaaaagaccgacgcc
aagggcgacaagaaaaaagccgccgccaagaccccgaccaagcgcaagagcgccaaccgt
ccgaagcctgattctctggtgagcagcgacggcatggccccgctcaagcgccgcaagccg
gctgcacctgcggccgagtaa
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