Pseudomonas sp. Stari2: NH234_08595
Help
Entry
NH234_08595 CDS
T10554
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NH234_08595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdt02000
]
NH234_08595
02044 Secretion system [BR:
psdt02044
]
NH234_08595
Transporters [BR:
psdt02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NH234_08595
Secretion system [BR:
psdt02044
]
Type I secretion system
Adhesin protein transporter
NH234_08595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_33
AAA_29
AAA_22
DUF87
RTX
EMP70
Motif
Other DBs
NCBI-ProteinID:
XCY01966
LinkDB
All DBs
Position
complement(1857542..1859701)
Genome browser
AA seq
719 aa
AA seq
DB search
MTSMEPGVSGVDPRLSFDDPLLDGLLILCKLHGATVSRASLSAGLPLDKQRLSLELLPRA
AARAGLQARLLRRDLKDISSLNLPVLLLLSNGRTAVLRRFADDGKALILPSEADGGEQWV
SREELTEHYTGQALFARPRHELEDLRSPLVPRVQAWFRDTLKLSKWLYSDAILASFLINL
LGLMVPLFVMQTYDRVVPNQATSTLWVLAIGLLIGTGFELVLRVVRAHLLDTAGKKTDVI
LSATLFERITGMAMKARPATIGGFAQSIHDFQGLREFLTAVTLTSLIDLPFVVLMLVVIG
LLGGWLVVIPLLAFPITIVFAMIIQVRLRDTVQKSLSLGAERQALLIETLGGLETLKACS
AESERQHKWESTHGALTRLDSHARNLSALATNGTLFIQQFSGMATIVAGVYSIIAGNLSV
GALVASYMLGSRVLAPLGQIAGLITRYQQAQLTMKSTDALMALPQERDGKQRPLERTQLQ
GALDISGVTFHYNGQNAPALSNVSFSLKPGERIGIIGRSGSGKSTLARLVMGFYEPEEGQ
LLLDGLDLRQLDVADLRQQIGYVAHDLPLLAGSLRDNLTLGARYVSDSRMLEVAELTGVT
ELARQHPQGFDRPVGERGQLLSGGQRQAVLLARALLLDPPIMLLDEPTSAMDNSSEDVLR
QKLHGWVQGKTLLLVTHRTSMLSLVDRLLVLDKGRIVADGPKEAVIDALRKGRVGSAAV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcatggaacccggtgtttccggggtcgatccgcggctgagcttcgatgatccg
ttactcgacggtctgttgatcctctgcaaactccatggcgcgacggtcagtcgcgccagc
ctgagtgccggcctgcccctggacaagcaacgcctgagccttgagctgctgccccgcgcc
gcagcccgggccggtttgcaggcgcggctgctgcgccgcgacctaaaggacatctcctcg
ctcaacctgccggtgctgttgctgttgagcaatggccgcaccgccgtattgcggcgtttt
gccgatgacggcaaggccctgattctgcccagtgaagccgatggcggcgaacagtgggtc
agccgcgaagaactcaccgaacactacaccggccaggccttgttcgcccggccccggcat
gaactggaagacctgcgctcaccgcttgtgccgagggttcaggcgtggtttcgcgacacc
ctgaagctgtcgaaatggctctacagcgacgcgatcctcgccagttttctgatcaacctg
ttgggcctgatggtgccgctgttcgtcatgcagacctacgaccgcgtggtgccgaatcag
gccacgtcgaccctgtgggtgctggccatcgggttgctgatcggcaccggtttcgaactg
gtgttgcgggtggtgcgcgcgcacctgctggacaccgccggcaagaagaccgacgtgatc
ctttccgcgacgttgttcgagcgcatcaccggcatggcgatgaaggcccggccggcgacc
atcggcggtttcgcccagagcattcacgactttcaggggctgcgggaatttctcaccgca
gtgactctgaccagcctgatcgacctgcccttcgtggtgctgatgctggtggtgatcggc
ctgctcggtggctggctggtggtgattccgttgctggcgtttccgatcacgatcgtgttc
gcgatgatcattcaggtgcgcctgcgtgacaccgtgcaaaaaagcctgagcctcggtgcc
gagcgtcaggcgctgctgatcgaaaccctcggcggtctggaaaccctcaaggcctgtagc
gccgaaagcgagcgccagcacaaatgggaaagcacccacggcgccctcacccgcctcgac
agccatgcgcgcaacctctcggcactggccaccaacggcacgctgttcatccagcaattc
tcggggatggcgaccatcgtcgccggggtctacagcatcatcgccggcaacctcagcgtc
ggcgcgctggtggccagctacatgctcggcagtcgcgtgcttgcaccactgggccagatc
gccgggctgatcacccgctaccagcaagcgcaactgaccatgaaaagcaccgacgcgctg
atggccctgcctcaggagcgcgacggcaaacagcggccgctggagcgcacgcaactgcaa
ggcgcactggacatcagcggtgtgacctttcattacaacggccagaatgcaccggccctg
agtaacgtcagtttcagcctcaaacccggcgagcggatcggcatcatcggccgcagcggt
tccggcaaaagcaccctggcgcggctggtgatgggtttctacgaaccggaagaaggccag
ttgctgctcgacggcctcgacttgcggcaactggatgtcgccgacctgcgccagcagatc
ggttacgtcgcccatgacctgccgctgctggccggcagcctgcgcgacaacctcacgctc
ggcgcccgctacgtcagcgactcgcgaatgctcgaagtcgccgaactgaccggtgtcacc
gagctggcacgccagcatccgcaaggcttcgaccggccggtgggcgaacgcgggcaattg
ctctccggcgggcaacgtcaggctgtgctgctggcccgagcactgctgctcgacccgccg
atcatgctgctcgacgaacctaccagcgccatggacaacagcagcgaagacgtcctgcgc
cagaagctccacggctgggtgcagggcaagacgctgctgctggtcacccaccgcacctcg
atgctgagcctggtggaccggttgctggtgctggacaagggccggatcgtcgccgacggt
ccgaaagaagcggtcatcgatgcactgcgcaagggccgggtcggctcggcggcggtctag
DBGET
integrated database retrieval system
