Pseudomonas sp. Stari2: NH234_08785
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Entry
NH234_08785 CDS
T10554
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00260
Glycine, serine and threonine metabolism
psdt00460
Cyanoamino acid metabolism
psdt00630
Glyoxylate and dicarboxylate metabolism
psdt00670
One carbon pool by folate
psdt00680
Methane metabolism
psdt01100
Metabolic pathways
psdt01110
Biosynthesis of secondary metabolites
psdt01120
Microbial metabolism in diverse environments
psdt01200
Carbon metabolism
psdt01230
Biosynthesis of amino acids
psdt01240
Biosynthesis of cofactors
psdt04981
Folate transport and metabolism
Module
psdt_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NH234_08785
09102 Energy metabolism
00680 Methane metabolism
NH234_08785
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NH234_08785
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NH234_08785
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NH234_08785
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NH234_08785
Enzymes [BR:
psdt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NH234_08785
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
XCY02003
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Position
complement(1913196..1914545)
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AA seq
449 aa
AA seq
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MPVNTEQLPNQADLLRRGLADLRAEDAELAQILDAEVTRQHRTLSLVSSSCAVKPRTLVA
SASALVNVTAEGMPGRRYNAGCENVTRVESLAIRRARELFDAQYANVQSHSASNANYQVL
TGLLEPGDTLLGMAVEHGGHLTHGNTAAFSGDHYKAIQYGTTAEGLIDYDQVRRLALDHR
PRIIMCCANAYSQVVDFEWFREIADEAGAILLADISHIAGLVATGRHPSPINVAHVTTTC
THKQLMGPRGGLILSGRDANTKVPGLRTTFSRALDQAVFPGMQGAPAVNMIAAKAAALGY
ARSAEFDAYMARIRSTADEFASAFQAHDYEVVGGRSENHAVLLQLRNGITGAIAEAALEH
CGIIVNKHRVPGETRSSLVTSGLRIGTGSIAQRHIDARGCRQIVDLMCRILDNVTPLGEQ
DYTLAPTLREQFRLQTEALCALYPITDYA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcaataccgaacagcttccgaatcaggccgatttactgcgacgtggcctggcg
gatctccgggcggaagacgccgaactcgcacagatcctcgacgctgaagtcacgcgtcaa
caccggacgctctcgctggtctcctcctcttgcgcagtcaagcctcgcacgttggtggca
tcggcgtcggcgctggtcaatgtgacggccgagggcatgcccggcaggcgctataacgcc
gggtgcgagaacgtcacccgggtcgagtcgctggccatccgaagagctcgggagctgttc
gacgcccagtacgccaacgtgcaatcacactcggcgtcgaacgccaactaccaggtgctc
accggcctgcttgagccgggagatacgctgctgggaatggccgtcgaacacggaggccat
ctcacccacggcaacaccgccgcattctcgggcgaccactacaaggcgatccagtacggc
acgaccgccgaaggtctgatcgattacgaccaggtacgccgactggccctcgaccaccgc
ccgcgcatcatcatgtgctgtgccaatgcctattcgcaggtagtggacttcgaatggttc
cgtgagattgccgatgaagccggggccatcctgctcgctgatatttcgcacatcgccgga
ctggttgccaccgggcgacatccgagcccgatcaacgttgcacacgtcaccacgacctgc
acacacaagcaactcatgggcccccgcggcggcctgatcctttccggccgggacgcgaac
accaaagtacccggcctgaggacgaccttcagtcgtgcccttgatcaagccgtgtttccc
ggaatgcagggcgcgccggccgtcaacatgatcgcggcaaaggcggcggcacttggctat
gcaaggtcggcagagttcgacgcctacatggcgcggatccggagcacggccgatgagttc
gccagtgcgtttcaggcccatgactacgaggttgtgggcgggcgcagtgaaaaccacgcg
gttctgcttcagttgcgcaacggcatcaccggcgccattgcagaggcggcgctggagcac
tgcgggatcatcgtgaacaaacaccgcgtccccggcgaaacccgatcatccctcgtgacc
agtgggctgcgcatcggcaccggatccatcgcgcaacgccacatcgacgcccggggatgt
cgacagattgtcgatctgatgtgccggatcctggacaatgtgacgccgctcggcgagcag
gattacacgctggcccccacactgagggagcaattccgcctacagaccgaagcgctgtgc
gcgctgtatcccatcactgactacgcatag
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