Pseudomonas sp. Stari2: NH234_09010
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Entry
NH234_09010 CDS
T10554
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt02020
Two-component system
psdt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NH234_09010
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NH234_09010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psdt02022
]
NH234_09010
02035 Bacterial motility proteins [BR:
psdt02035
]
NH234_09010
Two-component system [BR:
psdt02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
NH234_09010
Bacterial motility proteins [BR:
psdt02035
]
Flagellar system
Flagellar assembly proteins
Others
NH234_09010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA_2
AAA
AAA_3
FleQ
HTH_30
HTH_20
MerR
AAA_19
nSTAND3
HTH_24
AAA_22
HTH_28
HTH_11
Sigma70_r4_2
HTH_23
ATPase
DUF2249
AAA_7
HTH_17
HTH_Mga
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
XCY02043
LinkDB
All DBs
Position
1968156..1969547
Genome browser
AA seq
463 aa
AA seq
DB search
MGIKVLLVEDDRSLREALADTLLLAGHDYHAVGSAEEALKAVECEAFSLVVSDVNMPGMD
GHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDLVARHALG
NLGTVDAEGPVAVEPASAQLLDLAARVARSDSTVLISGESGTGKEVLARYIHQQSHRASQ
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPITLDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRP
LRERTADILPLAERLLAKHVNKMKHAMAKFSPEAQAYLIGYPWPGNVRELDNAVQRALIL
QQGGLIQPQDFCLSGPALFAPLPVAVPTAPVIREVDIEADSAGALGDDLRRREFQMIIDT
LRTERGRRKEAAEKLGISPRTLRYKLAQMRDAGMDVEGYLFAT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaggttctgctggtcgaggatgaccgttcattgcgcgaggcgctggccgat
acgctgctgctggccggtcacgactatcacgccgtgggttctgccgaggaggcgctgaag
gccgtggagtgcgaggcgttcagcctggtggtcagcgacgtcaacatgccgggtatggac
ggtcaccagttgctcggcctgctgcgcgcgcgccagccgcaattgccggtgctgctgatg
acggctcacggcgccgtcgagcgcgcggtcgatgccatgcgtcagggcgcggcggactat
ctggtcaagccattcgagcccaaggcgctgctggatctggttgcgcgccatgccctgggc
aacctcggcacagtcgacgcagaagggccggttgccgtcgagccggccagtgcgcagttg
ctggatctggcggcgcgggtcgcccgcagcgattccactgtgctgatttccggcgagtcc
ggtaccggcaaggaagtgctggcgcgctacattcaccagcaatcccatcgcgcgagtcag
ccgttcatcgcgatcaactgcgcggcaatccccgacaacatgcttgaagcgacattgttc
ggtcacgagaaaggttcgttcaccggcgccatcgcggcgcaggccggcaagttcgagcag
gccgacggcggcaccattctgctcgacgagatttccgaaatgcccctgggcttgcaggcc
aagttgctgcgagtcttgcaggagcgcgaagtcgagcgggtcggcgcacgcaagccgatc
accctcgacattcgtgtcgtcgccaccaccaaccgtgatctggcgggcgaagtggcggcg
gggcggttccgtgaagacctctactatcgcctgtcggtgtttccgctggcctggcgtccg
ctgcgtgagcgcaccgccgacatcctgccgctggccgagcgtcttttggccaaacacgtc
aataaaatgaagcatgcgatggcgaagttctcgcccgaggcgcaggcgtacctgatcggt
tatccatggccgggcaatgtgcgcgagctggataatgcggtccagcgggcgttgattctg
cagcagggcggcttgatccagccccaggatttctgtctctccgggcctgcgctgttcgcc
ccgttaccggtggcagtgccgactgcaccagtcattcgtgaagtcgacatcgaggcggac
tcggccggtgcactgggcgatgacctgcgtcgtcgcgagttccagatgatcatcgacacc
ctgcgcaccgaacgcggtcgacgcaaggaagccgccgaaaaactgggtatcagcccgcgt
acgttgcgctacaaactggcgcaaatgcgcgatgcggggatggacgtcgaagggtatctg
ttcgccacgtaa
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