Pseudomonas sp. Stari2: NH234_09385
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Entry
NH234_09385 CDS
T10554
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00020
Citrate cycle (TCA cycle)
psdt00190
Oxidative phosphorylation
psdt00650
Butanoate metabolism
psdt00720
Other carbon fixation pathways
psdt01100
Metabolic pathways
psdt01110
Biosynthesis of secondary metabolites
psdt01120
Microbial metabolism in diverse environments
psdt01200
Carbon metabolism
Module
psdt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psdt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psdt_M00149
Succinate dehydrogenase, prokaryotes
psdt_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NH234_09385
00650 Butanoate metabolism
NH234_09385
09102 Energy metabolism
00190 Oxidative phosphorylation
NH234_09385
00720 Other carbon fixation pathways
NH234_09385
Enzymes [BR:
psdt01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NH234_09385
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_9
Fer4_2
Fer4
Motif
Other DBs
NCBI-ProteinID:
XCY02117
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Position
2042876..2043580
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AA seq
234 aa
AA seq
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MLKVSVYRYNPDQDAAPFMQEFQVDTGGKDLMVLDVLALIKEQDEGFSYRRSCREGVCGS
DGMNINGKNGLACITPLSAVVKGNKLVIRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQN
DTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTKTSERLASLDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHIRNMLLSSGV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagtcagtgtttatcgttacaaccctgatcaggacgctgcgccgttcatgcag
gaattccaggtcgataccggtggtaaggacctgatggtgctggacgtgctggccctgatc
aaagagcaggacgaaggtttctcctatcgtcgctcctgccgtgaaggtgtctgcggctcc
gacggcatgaacatcaacggcaagaacggcctggcgtgcatcacgccgctgtccgctgtc
gtcaaaggtaacaagctggtcatccgtcctctgccaggtttgccggttatccgtgacctg
gtcgtcgatatgagcatcttctacaagcaatacgagaaggttaagccattcctgcagaac
gacacgccggctccagccatcgagcgtctgcagtcccctgaagagcgtgaaaaactcgat
ggtctgtacgagtgcatcctgtgcgcctgctgctcgacctcttgcccgtccttctggtgg
aacccggacaaattcctgggtccagctgcactgctgcaagcgtaccgcttcctggcagac
agccgtgacaccaagacatccgagcgtctggcgtccctcgatgacccgttcagcgtcttc
cgctgccggggcatcatgaactgcgtcaacgtatgtccgaaaggcctgaacccgactaag
gccatcggtcacatccgtaacatgctgctttcgagcggcgtgtga
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