Pseudomonas sp. Stari2: NH234_09710
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Entry
NH234_09710 CDS
T10554
Name
(GenBank) RHS repeat protein
Organism
psdt Pseudomonas sp. Stari2
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
DUF4595
OCRE
DUF6393
Motif
Other DBs
NCBI-ProteinID:
XCY02176
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All DBs
Position
2107316..2112085
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AA seq
1589 aa
AA seq
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MNAVVRIEQELDSFPRTLDLYRKQLKHWLSRSADSVSHAADLPSLMGMERIIRFGEHSMA
VAIDDKRFSSAVVQCTKTGPMEIESKFESVYDIPLGGIAVDVVAVDSGEVKSVTLDAQGK
GVFTGQAGKFYRVVVHSEASEQQVDALFESYDGLTQQLDSWLRSEWQGFKPQWSQSVATA
AGNGMLAGSWAAIEGVWDSIGLLSEILQDPGKFAERLGSGATQLIALAETAPEMMEKLQL
LVSDEAALCLLLRTASLWLEMLPPSEVAGKTAEAVSMVVVQLLIDVLIGVVLTFVGAGAG
IAYLTLRLAERGAQLLSAVTRLVKAMFGIVSTFIGYVNQYKSVAARGIAAGVKKGRMQLR
WDARRNASLKKDERHDDTPDQAKNPNGDSVDCAPLTCTNGCPVSMVTGEELLTLTDGVLD
GLLPFEFSRLYRTSAAEIDVGLGFGWSHSLAHRLEVDGASVVWVDHENRRTRFPLPSVER
PAIHNSLSRAAIFLGDEPEELIVALAGEAARFYHFRVGRLTAVSDAYGNRLRISRDRLDR
VERLDNGAGRSLLLRYERAHLIAVDYQVFRESAWRTEQTLASYRFDARHRLIEASNAVGE
TERYDYDDRHVILQRQLSGGASFFWEWERAGKAARCVRHWASFSQMDTRYVWDDAGSVTV
HYVDGTEETYVHDDTARLVRQVAADGGEQLKAYDSAGRLVAEQDALGAVTEYRYDDAGRL
IALIPPDDAPTSYEYRNGFLHSRSRGDAVWTYRRNAQGDVTEAVDPDGHVTHYHYDPQGR
LLSIRYPDSGRHVFVWNDLGQLVEESLPDGGIRKFSYDALGRRITVQDEHGAITRHVWDA
VGRLIQTTSPNGATRAWSYSAYGQITAERDEQGRITRYEYDDDLHLVSRRINPDGTRLQY
RYDHAQLLLTEIENESGEKYRLDYTPTGLIRQETGFDGRRTAYAYDRNGHLLEKTEFGDD
GSTLVTGYQRDAAGRLLLKTLPDASTVEYRYDRLGRLVGVDDGQNHPLAFEYDLQDRLVR
EHQGWGTLRYTYDACGQLRRMRLPDNSKLDYHYAKGGALTAIDLNGALLTRHVYQNGREQ
QRQQGLLLSEYAYDEQGRLLSHAVGHQRSALYRRDFAYSANGNLEHIADTRHGQRSYQYD
ALDRLIRVRHTRDDVPENFAHDPAGNLLLQDRPGPTSIKGNRLLMQGDRHYDYDAFGNLI
RERRGRGQQLVTEYRYDSQHRLIGLTRPDGKTTSYQYDAFGRRIRKTVDGQTTEFFWQGD
HLIAESSPTQHRSFIYEPGTFRPLAMLDGQGPKRACPFYYQLDHLGTPQELTDYSGDIVW
SAKYSAYGKVTSLQLATEDYLDQPLRFQGQYFDDESGLHYNRHRYYDPDVGRYLTPDPVK
LAGGLNQYRYVPNPTGWVDPLGLTSNCPPPNKPGCPVPDGVGGSVVDEGEPALPKMTAQE
RRARIDELAEGNAYRRLEEMERSTPGAHFLEKHGKQTTLASQQERSLTGRNPTTGIIEIY
TNGNKAGQPKIPSAATHFFSYRDQLNAIHRAQLIFRRNGIVATREPMNMGKIVGEGYKRG
GLTYGQQTHAIVILNGSGKPITSYTEFME
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgtcgtccgcatcgagcaagaactcgacagctttccccgtacccttgatctc
tatcgcaaacagctgaagcactggctcagtcgctcggcagacagtgtcagccatgcggct
gatttgccgtcactgatggggatggagcggatcatccgtttcggcgaacacagcatggcg
gtcgccattgacgacaagcgtttctcttcggccgtcgtgcaatgcacgaaaaccgggccg
atggagatcgagagcaagttcgagtcggtgtacgacattccattgggcggcatcgctgtc
gatgtggtggcggtggatagcggcgaggtcaagtccgtcacactcgatgctcagggcaag
ggcgtgttcaccggtcaggcgggcaagttctaccgggtggtggtgcacagtgaggccagc
gagcagcaggtcgatgcgcttttcgaatcctacgatggcctgactcagcaactggatagt
tggctgcgcagcgagtggcagggcttcaagccgcaatggtcgcagtcggtggccacagca
gccggcaacggcatgctggcggggagctgggcggcgatcgagggagtgtgggatagcatc
ggactgttgtcggaaattctccaggatcccggaaagttcgccgagcggttgggcagtggc
gccacgcagctgatcgcgctggcggaaacagcgccggaaatgatggagaagcttcagtta
ctggtcagtgacgaagcggcgctgtgtttgttgctgcggactgccagcctctggctggag
atgctgccacccagtgaagttgccgggaaaaccgccgaggcggtatcgatggtggtggtg
cagctgctgatcgatgtgttgatcggcgttgtgttgaccttcgttggcgccggtgcgggg
atcgcgtatctgaccttgcgtctggcggaacgtggcgctcagttgctgtcggcggtgacg
cgcctggtgaaggcgatgttcggcatcgtcagcaccttcatcggctatgtgaaccagtac
aaatccgtcgccgcacggggcatcgccgccggggtgaaaaagggccgcatgcaattgcgc
tgggatgcccggcgtaatgcttccctgaaaaaggatgagcgacacgacgacacgccggat
caggcgaaaaatcccaacggcgacagtgtcgattgtgcgccgctgacctgcaccaacggt
tgccccgtgtcgatggtcaccggcgaagagttgctgacgctgaccgatggcgtgctcgat
gggctgctgccgttcgagttcagccgcttgtatcgcaccagtgccgccgagatcgatgtc
gggttggggtttggctggagccattcgctggcgcatcggctggaggttgatggcgcttcg
gtggtctgggttgaccatgagaaccggcgcacgcggtttccgctgccgagtgtcgagcgg
ccggcgattcacaacagtctgtcgcgggcggcgatctttctcggggatgagccggaggag
ttgattgttgcgctggcgggtgaggcggcgcggttttatcactttcgggttgggcgtctg
acggctgtcagcgatgcctatggcaaccggttgcgcatttcgcgtgatcgtctggatcgg
gttgagcgcctcgacaacggcgctggtcgttccctgttgctgcgttatgagcgggcgcat
ctgatcgcggtcgattatcaggtttttcgggagtctgcctggcgtaccgagcagacgctg
gccagttaccgctttgatgcccgccatcgattgatcgaggcgtcgaacgcggtcggcgag
actgagcgttacgactacgacgaccggcacgtcatcctgcaacggcaactgagcggcggc
gcgagcttcttctgggaatgggagcgtgccggcaaggcggcgcgttgcgtgcggcactgg
gcgtcgttttcgcaaatggatacgcggtacgtctgggatgacgccggcagcgtcaccgtg
cattacgtcgatgggactgaggaaacttacgtccacgacgacacggcgcggctggtgcgt
caggtcgccgccgacgggggcgaacagctcaaggcctacgattcggcgggccggctggtt
gccgagcaggatgcgctgggggcggttaccgagtaccgctacgacgatgccggacggctg
atcgcgctgattccgccggacgatgcgccgacgtcctacgagtaccgcaatggtttcctg
cacagccgctcacgtggcgatgcggtgtggacgtaccggcgcaatgcgcagggtgacgtt
accgaggcggtcgatcccgacggccatgtcacccattaccactacgatccgcagggacgg
ttgctgtcgatccgttatccggacagtggtcggcatgtgttcgtgtggaacgaccttggg
caactggtcgaggaaagtctgccagacggtgggattcggaagttttcctacgatgccttg
gggcggcggattactgtgcaggacgaacatggcgcgatcacccgtcatgtgtgggacgcc
gtcggccggctgatccagaccacttcgccaaatggcgccacccgcgcctggtcctacagc
gcctacggccagatcaccgccgaacgcgatgaacaggggcggatcacccgctacgagtat
gacgacgatctgcatctggtcagccggcggatcaatcccgacggcacgcggctgcaatac
cgctacgaccatgcgcagctgctgctgacggagatcgagaacgagtccggcgaaaagtac
cggctggactacacgcccaccggattgatccgacaggaaaccggttttgacgggcgacgc
accgcgtacgcctacgaccgcaacggccacctgctggaaaagaccgagttcggtgacgac
ggctcgacgctggtcaccggctatcaacgcgatgctgctgggcgtctgctgctcaagacc
ctgcccgatgccagcacggttgaataccgctacgaccgtctaggccgcttggtcggcgtg
gatgacggccagaatcacccgctggccttcgagtacgacctgcaggaccgactggtacgc
gagcatcagggctggggcaccttgcgttacacctacgatgcttgcggccagctccgccgg
atgcgtctgccggacaacagcaagctcgattaccactacgccaagggcggcgcgctgacc
gcgatcgacctcaatggcgccttgctcacccgccacgtctaccagaacggtcgcgaacag
cagcgccagcaaggcctgttgctcagcgaatatgcctacgacgaacagggccgcttgttg
tcccacgccgtaggccatcaacgcagtgcgctgtaccgccgcgactttgcctacagcgcc
aacggcaacctcgaacacatcgccgacacccgccacggccagcgcagctaccagtacgac
gccctcgaccggctgatccgcgtgcgtcacacccgtgacgatgtgccggaaaacttcgcc
cacgacccggccggcaacctgttgctgcaggatcggcccggcccgaccagcatcaaaggc
aaccgcctgctgatgcagggcgaccgccattatgactacgacgccttcggcaacctgatc
cgcgaacgccgcggccgcggccaacaactggtcaccgaataccgctacgacagccagcac
cgcctgatcggcctcacccgtcccgacggcaaaaccacgagctaccaatacgacgccttc
ggccgccgcatccgcaaaaccgtcgatggccagaccaccgagttcttctggcaaggcgac
catctgatcgccgaaagcagtccgacccaacaccgcagcttcatctacgaacccggcacc
ttccgcccgctggcgatgctggacggccaaggcccgaaacgcgcctgcccgttctactac
caactcgaccacctcggcaccccgcaagaactgaccgactacagcggcgacatcgtctgg
tcagccaaatacagcgcctacggcaaggtcacctcgctgcagctcgcgaccgaggactac
ctcgaccagccgctgcgctttcaggggcagtacttcgatgacgaaagcgggctgcattac
aaccggcaccggtattacgacccggacgtggggcggtatctgacgccagatccggtgaag
ctggcgggggggctgaaccagtaccggtacgtgccgaatccgacggggtgggtggatccg
ttaggactgacctccaactgcccgccgccgaataagccgggatgtccggtgccggatggg
gtaggtggttcggttgttgatgagggtgagccagcgctgccgaagatgacggcgcaagag
cggagggcgagaattgatgagttggcggagggcaatgcctacaggcgtttggaggaaatg
gagaggtccacgccaggcgcacactttttagagaaacacggcaagcagaccacgctggcc
tcgcaacaagaacgttcacttacaggaagaaatcctacaacgggcattattgagatttac
accaacgggaataaagctgggcaaccaaaaataccaagtgcggccacacattttttcagt
tatcgagaccagttgaacgccatacatcgtgctcagctgatttttaggcgaaatgggata
gttgctacaagagaaccgatgaatatgggcaaaattgtcggtgagggttacaaaagagga
ggattgacttatgggcagcaaacacatgcgatagtgattttaaatggttctggtaagcct
ataacctcttatacggaatttatggaatga
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integrated database retrieval system