Pseudomonas sp. Stari2: NH234_10720
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Entry
NH234_10720 CDS
T10554
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NH234_10720 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psdt03400
]
NH234_10720 (uvrB)
DNA repair and recombination proteins [BR:
psdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NH234_10720 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NH234_10720 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
XCY02371
LinkDB
All DBs
Position
2372564..2374579
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AA seq
671 aa
AA seq
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MSEFQLVTRFDPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALVRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESISAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAIEGIKVELQERLEYLRNNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEGVSPQTIFVSATPGNYEAEHAGRVIEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEITKRVALEERVLVTTLTKRMAEDLTDYLADHGIRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRMTGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEENAKYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQMRDE
IAKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattccagctcgtcacccgattcgaccctgccggcgatcagcctgaagccatt
cgccagatggtcgagggcattgaagccgggctggcgcaccagacgttgctcggcgtgacc
ggttcgggcaagaccttcagcatcgccaatgtgattgcgcaggtgcagcgtccgaccctg
gtgctggcgccgaacaagaccctggccgcgcagttgtatggcgagttcaagtcgttcttc
ccgaacaatgccgtcgaatacttcgtttcctactacgactactaccagcccgaagcctat
gtgccgtcttccgacaccttcatcgagaaggatgcgtcgatcaacgaccacatcgagcag
atgcgtctgtcggcgaccaaggccttgctggagcgcaaggatgcaatcatcgttacgacc
gtgtcgtgcatttacggtctgggcagcccggaaacctatttgaaaatggtgttgcacgtc
gatcgtggcgacaagctcgatcagcgtgcgttggtgcggcgtctggccgacctgcaatac
acccgcaacgacatggatttcgcccgggcgacgtttcgggtacgcggcgacgtgatcgac
atttatccggccgagtccgacctcgaagcgatccggatcgagctgttcgatgacgaagtg
gagagcatttccgcgttcgacccgctcaccggcgaggtcatccgcaagctgccgcgattc
accttctacccgaagagccactatgtgacgccccgggaaaccctgctcgacgccatcgag
gggatcaaggtcgagttgcaggagcgcctggaatacctgcgcaacaacaacaaactggtg
gaagctcagcggctggagcagcgtacccggttcgacctggagatgatcctcgaactcggc
tactgcaacggcatcgagaactactcgcgctacctgtcgggccgtccggctggcgcgccg
ccgccgaccctctacgattacctgccggccgacgcgttgctggtgatcgacgaatcccat
gtcagcgtgccgcaggtcggcgcgatgtataagggcgaccgttcacgtaaggaaacactg
gtggaatacggtttccgcctgccatcggcgctggataaccggccgatgcgtttcgacgag
tgggaaggggtgagcccgcagacgattttcgtttcggccacgcccggcaactacgaagcc
gagcacgccggtcgggtgatcgagcaagtggtgcgcccgaccggtctggtcgatccgcag
gttgaagtacgaccggcgctgactcaggtcgacgatcttttgtcggaaatcaccaagcgg
gtagcgctggaggagcgggtgctagtcaccacgctgaccaagcgcatggcagaagacctg
accgattacctggccgaccacggcattcgtgtgcgttatctgcactcggacatcgacacc
gtcgagcgggtcgaaatcatccgcgacctgcgcctgggcaccttcgacgtgctggtgggg
atcaacctgctgcgtgaaggcctggacatgccggaagtctcgctggtggcgatcctcgat
gcggacaaggaaggcttcctgcgttccgagcgttcgctgatccagaccatcgggcgtgcg
gcacgtaacctcaatggccgggcgattctctacgcggatcgcatgaccggttcgatggag
cgcgctatcggcgaaaccgagcggcgtcgcgacaagcagatcgccttcaacctggccaac
ggcatcacgccgaagggcgtgttcaaggacgtcgccgacatcatggaaggcgccactgtg
cctggctcgcgcagcaagaagcgcaaaggcatggccaaggccgccgaagaaaacgccaag
tacgaagccgaattgcgctcgccaagcgagatcaccaagcgcatccgccaactggaagag
aagatgtaccagttggctcgcgacctggagttcgaagcagcggcgcagatgcgcgacgag
atcgccaagctgcgcgagcggcttttggcagtctga
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