Pseudomonas sp. Stari2: NH234_10830
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Entry
NH234_10830 CDS
T10554
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psdt Pseudomonas sp. Stari2
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psdt03016
]
NH234_10830 (truA)
Enzymes [BR:
psdt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NH234_10830 (truA)
Transfer RNA biogenesis [BR:
psdt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NH234_10830 (truA)
Prokaryotic type
NH234_10830 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
XCY03069
LinkDB
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Position
2397099..2397923
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AA seq
274 aa
AA seq
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MAPEGFFRVALGVEYKGSRYSGWQRQSTGVLTVQETLEKALSKVANSPVSLQCAGRTDAG
VHACGQVVHFDTQVDRSLKAWVMGANINLPHDISVSWAKVMPAHFHARFKAIARRYRYVI
YNDQIRPAHLNEEITWNHRPLDVERMAEAAQYLIGTHDFSAFRAGQCQAKSPIKQMHHLR
VTRHGKMIVLDIRANAFLHHMVRNIAGVLMTIGAGERPPEWMKEVLESRERRSGGVTAHP
FGLYLVQVEYHDEFPLPERFIGPHFLTGFSELDG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgaaggcttttttcgtgtcgccttgggcgttgaatacaagggctcgcgctac
agcggctggcagcgtcagtccacgggtgtgctcacggtgcaggaaaccctggagaaagcc
ttgtcgaaggtcgcgaactcgccggtttcgctgcaatgcgccgggcgcacggacgccggt
gtgcatgcctgcgggcaagtcgtgcatttcgacacccaggtcgaccgctcgctgaaagcc
tgggtcatgggggccaatatcaatctgccccacgacatcagtgtcagttgggcgaaggtc
atgcctgcgcacttccatgcgcggttcaaggccattgcccggcgctatcgctacgtgatc
tacaacgatcagatccgtccggcgcatctcaatgaagaaatcacctggaatcaccgtccg
ctggacgtggagcgcatggctgaggccgcgcagtatctgattggtacccatgatttcagc
gcgtttcgggcagggcagtgtcaggccaagtctccgatcaagcagatgcatcatctgcgc
gtgactcgtcacggcaagatgatcgtgctggacatccgtgccaacgcctttctgcaccac
atggtgcgtaacatcgccggggtgctgatgacgatcggtgccggcgaacggccgccggag
tggatgaaagaggtccttgagagccgcgagcggcgctccggcggcgtcacagcgcacccg
ttcgggctgtacctggtgcaggtcgagtaccacgatgagttcccgttgcccgagcgtttc
atcgggccacatttccttacgggtttctcggaacttgacggctga
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