KEGG   Pseudomonas sp. Stari2: NH234_11980
Entry
NH234_11980       CDS       T10554                                 
Symbol
vgrG
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
psdt  Pseudomonas sp. Stari2
Pathway
psdt03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psdt00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NH234_11980 (vgrG)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psdt02044]
    NH234_11980 (vgrG)
Secretion system [BR:psdt02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NH234_11980 (vgrG)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF2345 DUF6484 CofB_pilin_dom
Other DBs
NCBI-ProteinID: XCY02600
LinkDB
Position
complement(2629356..2631398)
AA seq 680 aa
MFAPANETHFALTIEGLSNDVQVFTLTGREAISQPFVFEVELVSEQPSLDLETLLHKPAF
LQLSPDGSGIHGLIYRAAQGDSGKRLTRYSVTLRPQLAYLAHRINQRIFQNLSVPKIIGK
VLEEHGIQGNAYEFQTGSIYPDRIYCVQYDESDLHFIQRLCEEEGIHYHFQHSATAHKLV
FGDDQTVFHKLAPVAYQQDSGMVASDPVIKRFDLRLETRTSRTTRRDYDFEKPRITLESE
NRGDALPDLEDYDYPGRFVDRERGKHLAKRALERHRSDFQLAEGKSDQPLLVSGHFLALK
EHPKAKWNDLWLLTEVHHEGKQPQVLEESVTSDTTALKDDFHQGYRNRFQATPWDVPNRP
PLHHPKPRILGSQSAVVTGPKGQEIHCDEYGRVKVQFHWDREGQADDKTSCWLRVSSAWA
GAQYGGIAIPRIGMEVLVTFLEGDPDQPLISGCLYHKENTVPYALPANKTRTTFKTLSSM
GGGGFNELRIEDKKGQEQIFLHAQRDWDENIEHDQKIRVGNERHDVVEKNSYTEFKAEEH
HTVYADRKVEARANDHLTVGVNQHIKIGTGQFIDAGQEIHLSSGMKVVLEAGAELTLVGG
GSFIKIDGSGVTMSGPAININSGGGPGSGTGAAPLMPGVLKQADADKAGAVLTPAQINTL
KRNAPFCEECEKCKAGACAI
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgttcgcgccggccaatgaaactcactttgccctgaccatcgaagggctttccaacgac
gttcaggtgtttaccctcaccggtcgggaagccatcagccagccttttgtgttcgaggtg
gagctggtcagtgagcagccgtcgctggacctcgaaaccctgctgcacaaaccggccttt
ttgcagctgtcgcccgacggcagcggcatccacggcctgatttaccgcgccgcgcaaggc
gattccggcaagcgcctgacgcgctattccgtgaccctgcgcccgcaactggcgtacctc
gcgcaccggatcaaccagcggatcttccagaacctcagcgtgccgaagatcatcggcaag
gtcctcgaagaacatggcatccagggcaacgcctatgagttccagaccgggtcgatctac
cccgatcgtatctactgcgtgcagtacgacgaatcggacctgcatttcatccagcgcctg
tgcgaagaagaaggcattcactaccacttccagcacagcgccacggcccacaaactggtg
ttcggcgatgaccagacggtgttccacaaactggcgccggtggcctatcagcaggactcc
gggatggtcgccagcgacccggtgatcaagcgcttcgatctgcgcctggaaacccgcacc
agccgcacgacccgccgcgattacgacttcgaaaaaccgcgcatcaccctcgaaagcgaa
aaccgtggcgacgccctgcccgacctcgaggattacgattaccccggccgtttcgtcgac
cgcgagcgcggcaaacacctggccaaacgcgccctcgagcgccatcgcagcgacttccag
cttgccgaaggcaagagcgaccagccgctgctggtcagcggccatttcctcgcgctgaaa
gaacacccgaaagcgaagtggaacgacctgtggctgctcaccgaagtccaccacgaaggc
aagcagccgcaagtgctggaagagtcggtgaccagtgacaccaccgcgctcaaagacgat
ttccatcagggttaccgcaaccgtttccaggccaccccatgggacgtgccgaaccgcccg
cccctgcaccacccgaaaccgcgcatcctcggcagccagagcgccgtggtcaccgggccg
aaaggccaggaaatccactgcgacgaatacggacgcgtcaaagtccagttccactgggac
cgtgaaggccaggccgacgacaagaccagctgctggctgcgcgtctccagcgcctgggcc
ggcgcccagtacggcggcatcgccatcccgcgcatcggcatggaagtgctggtcaccttc
ctcgaaggtgatcccgaccagccgctgatcagcggctgcctgtaccacaaggaaaacacc
gtcccctacgcgctgccggcgaacaagacccgcaccaccttcaagaccctgagttccatg
ggtggcggtggcttcaacgaactgcgcatcgaagacaagaaaggccaggaacagatcttc
ctccacgcccagcgcgactgggacgaaaacatcgaacacgaccagaaaatccgcgtcggc
aacgaacgccacgacgtcgtggaaaagaacagctacacggaattcaaggccgaagaacac
cacaccgtctacgcagaccgcaaagtcgaagcccgcgccaacgaccacctgaccgtgggc
gtgaaccagcacatcaagatcggcaccgggcagttcatcgacgccggccaggaaattcac
ctgagcagcggcatgaaagtggtgctggaggctggcgctgagctgacgttggtcggcggt
ggcagcttcatcaagatcgatggcagcggcgtgaccatgagcgggccggcgatcaacatc
aactccggcggtgggccgggaagcgggaccggggcggcgccgttgatgcctggcgtgctg
aaacaggcggatgccgacaaggctggcgccgtactgacgccggcgcaaatcaacaccctc
aagcgtaatgcgccgttctgcgaagagtgtgaaaaatgcaaggcaggtgcctgtgccatc
taa

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