Pseudomonas sp. Stari2: NH234_15425
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Entry
NH234_15425 CDS
T10554
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt01501
beta-Lactam resistance
psdt02020
Two-component system
Module
psdt_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NH234_15425
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NH234_15425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdt02000
]
NH234_15425
01504 Antimicrobial resistance genes [BR:
psdt01504
]
NH234_15425
Transporters [BR:
psdt02000
]
Other transporters
Pores ion channels [TC:
1
]
NH234_15425
Antimicrobial resistance genes [BR:
psdt01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
NH234_15425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
RE_LlaMI
Motif
Other DBs
NCBI-ProteinID:
XCX97760
LinkDB
All DBs
Position
3426248..3427543
Genome browser
AA seq
431 aa
AA seq
DB search
MKALPYSCIAPLIVLAGLTGPASASGFLDDAKTQVLSRNFFLSNDYRSPSSSGTNYKQEW
AQGFIGTFSSGFTDGTIGFGLDAHAFYGLKLDGGKGHSGTGLLPVDSDGRSESDYSSAGG
ALKLKASRTTLAFGEMTVETPVFDTSDKRLQPEYATGFLLNSREIDNVNLVAGHFTAFKN
QDSSSGQGDFQGYGANTKAGGISFIGADLFSDSPVGGALYASDLSETWHQYYANLHFKQS
GVLLDANVYHTRDTGQALAGEIDNTAFSLSGKYAFGPHAVMLGWQRINGDTPFDFVGGDS
IYLANSIKYADFNGAHERSWQARYDLDLGAFGIPGLNFMTRYVSGSHIDGTHAPKGGAYN
PFDPDSGQYQPQQGDGGKHWERDIDLRYIVQSGAAKDLSVQLSHVSHRANSAQAGDDIDR
IYVVIQYPLGF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgttaccgtactcctgcatcgccccgctgatcgtgctcgccggtctgaccggc
cccgcatccgccagcggtttcctcgacgacgcaaagacccaggtactcagtcgcaacttt
ttcctgagcaacgattaccgctcgccctcgtccagcgggacaaactacaaacaggaatgg
gctcaaggatttatcggtactttctcatcgggtttcacggacggaacaatcggattcggc
ctcgatgcacacgctttttatggtctgaaactggatggcggcaagggccattccggcacc
ggcttactccccgtggacagtgatggtcgcagcgaaagcgattattccagcgccggcggc
gccttgaaactgaaagcctcgcgcaccaccctcgccttcggcgaaatgaccgtcgagacg
ccggtgttcgacacctcggacaaacgccttcaaccggaatacgccaccgggtttttgctc
aacagtcgggaaatcgacaacgttaacctggtggccgggcatttcaccgcgttcaagaat
caggacagctcatccggccaaggcgactttcagggttatggcgccaacaccaaggccggc
ggaatcagcttcattggcgcagacctgttcagtgacagtccggtcggcggcgcgctgtac
gcttccgacctcagcgaaacctggcaccagtactacgccaacctgcatttcaaacagtcc
ggcgtgctgctcgacgccaacgtctaccacacccgcgacaccgggcaggcactggccggg
gagatcgataacaccgcgttcagtctctcgggcaaatatgcctttggccctcatgcggtg
atgctcggttggcaacgcattaacggtgacacaccgttcgatttcgtcggtggcgattcg
atctatctggccaactcgatcaaatacgccgacttcaatggcgcccacgagcgctcgtgg
caagcccgctatgacctcgatctcggcgcgtttggtattccgggactcaacttcatgacc
cgctacgtctccggcagccacatcgacggcactcacgcgcccaagggtggcgcctacaac
ccgttcgacccggacagcggccagtaccagccacagcaaggggacggcggcaaacactgg
gagcgcgatatcgacctgcgctacatcgtccagtccggcgcggccaaggacctttcggtg
cagctgtcccacgtctcgcatcgggccaacagtgctcaggcgggtgatgacattgaccgg
atctacgtggtgattcagtacccgctggggttctga
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