KEGG   Pseudomonas sp. Stari2: NH234_15780
Entry
NH234_15780       CDS       T10554                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
psdt  Pseudomonas sp. Stari2
Pathway
psdt03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psdt00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NH234_15780
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psdt02044]
    NH234_15780
Secretion system [BR:psdt02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NH234_15780
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF7949
Other DBs
NCBI-ProteinID: XCX97827
LinkDB
Position
3521224..3523272
AA seq 682 aa
MLDANATHITLTLEGASADLQVLSFTGREALNEPFRFDLELVSARPDLNLEELLHKPGCL
TFGATGEGKIHGLVYRIEQGDSGKTLTRYSLSLVPQLAYLRHNHDQQIFQQLTVPKIIAQ
VLEERGILADAYSFQLGAEYPQRDYCVQYDESDLHFIQRLCEEEGIHFHFQHSSSGHKLV
FGDDQTVFRKLQPVNYQQDSGMTADKPVIKRFNLRLETRTSRVSRRDYDFEKPKILPEGA
VKSAFAPDLEDYDYPGRFTTRERGKFLSTRALERHRSDYKLAEGKGDEPTLTSGHFLTLA
EHPRAEWNDLWLLLEIFHEGKQPQVLGENVTSDVTDNKSDFHQGYRNSFVATPWDAHYRP
ALEHPKPKVLGSQTAIVTGPAGEETHCDQYGRVKVQFHWDREGQADDKTTCWLRVASGWA
GAAYGGIAIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENVVPYDLPANKTRSTFKTLSSP
GGKGYNEFRIEDKKGAEQIYIHAQRDWDENIEHDQKIRVGNERHDTVEANTYSEFKVEEH
RITHLNRISEMRANDHLTVAVTQHLKVGTAQLVEAGTEIHYYAGQKVVIEGAMELTAKAG
GSFVKADAGGVTISGAEVKINTGGAPGVGTPAAPLLPGPMKVVDADKAGKAPLPARLNES
GITPLCGKQSNGACSRKDCTCM
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgctggacgccaatgctacccacattaccctcacgctcgaaggcgcttccgccgatctg
caagtcctcagcttcaccggtcgcgaagccctcaacgaaccgttccgtttcgacctcgaa
ctggtcagcgcccgtcccgacctcaacctcgaagaactcctgcacaagcccggctgcctg
accttcggcgccactggcgagggcaagattcatggcctggtgtatcgcatcgagcaaggc
gattccggcaagaccctgacccgctacagcctcagcctggtgccacagctggcctacctg
cggcacaaccatgaccagcagatcttccagcaactgacggtgccgaagatcattgcccag
gtgctggaagagcgcggcatcctggccgatgcctatagcttccagctcggcgcagagtac
ccgcagcgcgactactgcgtgcagtacgacgaatccgacctgcatttcatccagcgtctg
tgcgaagaggaaggcattcacttccacttccagcacagcagcagcggccacaaactggtg
ttcggcgatgaccagaccgtgttccgcaaactgcaaccggtcaactaccagcaagactcc
ggcatgaccgctgacaaaccggtgatcaaacgcttcaacctgcgcctggaaacccgcacc
agccgcgtcagccgccgcgactacgatttcgaaaaaccgaagatcctgcccgaaggtgcc
gtcaagtccgcgttcgccccggacctggaagactacgactaccccggccgcttcaccacc
cgcgagcgcggcaagttcctctcgacccgcgcgctggaacgccatcgcagcgattacaaa
ctcgccgaaggcaaaggtgacgaaccgaccctgaccagcggccatttcctgaccctggcc
gaacacccgcgcgccgaatggaacgacctgtggctgctgctggaaatcttccacgaaggc
aagcaaccacaagtgctcggcgaaaacgtcaccagcgacgtcaccgacaacaagagcgat
ttccaccagggctaccgcaactcgttcgtggccaccccgtgggacgcccactaccgccct
gccctcgaacacccgaaaccgaaagtcctcggcagccagaccgccatcgtcaccggcccc
gcgggcgaagaaacccactgcgaccagtacggccgcgttaaggtgcaattccactgggac
cgcgaaggccaggccgacgacaagaccacctgctggctgcgcgtcgccagcggctgggcc
ggcgctgcctacggcggcatcgccattccacgaatcggcatggaagtgctggtgaccttc
cttgaaggcgaccccgaccagccattggtgaccggctgcctgtaccacaaggaaaacgtc
gtcccttacgacctgccggcgaacaagacccgcagcaccttcaagaccctgagttcaccg
ggcggcaagggctacaacgaattccgcatcgaagacaagaaaggcgcggaacagatctac
atccacgcccagcgcgactgggacgaaaacatcgagcacgaccagaaaattcgcgttggc
aatgagcggcatgacaccgttgaagccaacacctacagcgagttcaaggtcgaagagcac
cgcatcactcacctgaaccgcatcagtgaaatgcgcgccaacgatcacctgaccgtcgca
gtgacccagcacctcaaggtcggcacggcgcagctggtcgaggctggaaccgaaatccac
tattacgccggtcagaaagtcgtgatcgaaggcgcaatggaactgaccgccaaggccggt
ggcagcttcgtcaaagccgatgccggcggcgtgaccatcagcggcgccgaagtgaagatc
aacaccggcggcgcaccgggcgtgggtacaccggcagcaccgttgttgccggggccgatg
aaggtggtggatgcggataaggctgggaaagcaccgctgcccgcccgcctgaacgaatca
ggcatcacgccgctgtgcggaaaacagagtaacggcgcttgcagccgtaaggattgcaca
tgcatgtaa

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