Pseudomonas sp. Stari2: NH234_15790
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Entry
NH234_15790 CDS
T10554
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
psdt Pseudomonas sp. Stari2
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
XCX97829
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All DBs
Position
3524150..3527701
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AA seq
1183 aa
AA seq
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MEITNHAVMPGETLGQIASRYNSTVAQLRQLNPFITNPDNVKVGWNLSVPKSAQAASAKP
AAEAPATSQAPAQASANAPAQCSAEDLVELDPVKDAPEGSSKTYKPFARACDKTYASAIY
ATEEQEFWLLPERAVSAIKESMFALEKMIAPNKARDARLNGLQESGLLEYFLEPKLSNFL
EGEKRARMEEFEAMGDEIEIDPATAKKRQNEANRNKPAAAPAQPPQEDTAQSRMDRLNAD
IAGQESIRKEFVDFHKRRAEWLTLKKEAVAAAKLEGYSYESGTLYSKDAIEARARVQAYL
EARKKLFANKDFKQVSLEDVAKALAEKKKSYENICTGMTDCTADLVAYAYTLHKNADALN
YHDYTESIIRVSEYGIALPEFALISDGLPSGIAQFKLYMDTEKKQAEITAQLQEKYKRWI
EATGQNAQAPAGLVDVERAEWDRLQKIKDDLQATAQQNVIAAKPGRHLIWEPEEFQPKPV
DRMVKPGFPLREVSLSDAKGTPLGWFSMTNLKDFKKIMAEDAQKAGRSYKKMGESVPTDA
TEDSDKNSETSSFRQWLVAQGAMKFSDQTGDCFDEKGWFKANDFYAYLKKEGYKVTELEN
SATLTSWGKHLQQLVFKKSVRGKVRLFDNSPQAQFVRCLTPPQPSIHGEVKLEGPKMTAA
EGFQMSANMGLSLDLARGEVQLMKVDMPAKESAKDITLDYLLDGKAQKMSFGRFSFHFGV
KAWGYAGASLLLAGSVELNPILGNVKYGATLSPVKRAQREDASAKEERADHDAAKKAKAD
SGDNSPTPDLEHKSTSGTYVDTKSTGQVLTGKKANVQIENGAKATFNVFGGLQAAIELTG
ALNWAPPKDLVALRTAPTMGIGSDKDAKKTNPWLTLAKLSGSVGVALGAGFQGTAQISLD
NGRFILNLKAAVVLGPGANGSFKFEIGYEAVVDIINLYRKELHKTKGRKVEWMAPEASEY
ASALNALGAAGLNVAMAYMMRWDVVMSLYEALTRSGKGGPIADTIMYYSDKKALEEWCIN
AIPDALGPLFRTLISTPEAFTITAASGTNGVADEKRVYNQAEAHVLQQKAIERILDWIVT
NAKKTNTIDKAQSQFEFACMSMNEFGIKDKNAKMSYCKNRMLLDSFMSESVRALFDDTSV
EARKHYKSHVKLLGANSAEFCEQNYIPHPNYSPSGATPFLKGY
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcacgaatcacgccgtcatgcccggcgaaaccctgggccagattgcctcacgc
tacaacagcaccgtggcccaactgcgccaactcaatcccttcatcaccaatccggacaac
gtcaaggtcggatggaatctgagcgtaccgaaaagcgcgcaagccgcgtcagccaaaccg
gctgctgaggcacccgctacgtctcaagcgcctgcccaggcatccgccaatgcgccggct
cagtgttcggccgaagacctggttgaactggaccctgtcaaggacgctccagaggggtcc
tcaaaaacctacaaaccctttgcccgtgcgtgcgataaaacgtacgccagcgccatttat
gcaacagaggaacaagagttctggctgctccctgagcgtgcagtgtctgccattaaagaa
tcgatgttcgccctggagaaaatgattgcgccgaacaaggcccgcgatgcgcgtctcaac
ggactgcaagagtcaggtctgctcgagtatttcctcgaacccaagttgagcaacttcctc
gaaggcgaaaaacgtgcccgcatggaagagttcgaagcaatgggcgatgagatcgaaatc
gatcccgccaccgccaaaaagagacagaacgaagccaatcgaaacaaacccgcggccgct
cctgcgcaacctcctcaggaagacactgcgcagtctcgtatggaccgtctgaatgcggac
atagcaggtcaggaaagtatccgcaaagaatttgtcgactttcacaaacggcgggctgaa
tggcttacgctgaaaaaagaggctgtagcggctgcaaagcttgaaggctactcctacgaa
agcggtacgctgtactccaaggatgcaattgaagcccgtgcccgcgtgcaagcgtatctc
gaggcccggaaaaagctattcgccaataaagacttcaagcaggtgtcactcgaagatgtc
gccaaggccctcgctgagaagaaaaaaagttacgagaacatctgcaccggcatgaccgac
tgcaccgccgacctcgtcgcttacgcttacacgttgcacaagaacgccgacgcgctgaat
taccacgattacaccgaatccattatcagagtttcagaatacggtatcgcgcttccagag
ttcgcgctgatcagtgacggcctgccatcgggcattgcgcaattcaagttgtacatggac
accgagaagaaacaggcggaaataaccgcacagctccaggaaaaatacaaacgctggatc
gaagccaccggacaaaatgcccaagcaccggcgggcctggttgacgtcgaacgagccgag
tgggatcgcctgcagaaaatcaaggacgacctgcaggcaacagcccagcaaaatgtgatc
gcggccaaaccggggcgccatctgatctgggaaccggaagagttccagcccaaacccgtc
gaccgcatggttaaacccgggtttcctttacgtgaagtcagtctctcggatgccaagggc
acgcccctgggctggttcagcatgacgaacctgaaagacttcaaaaaaatcatggcggag
gatgcacaaaaagctggccgttcctacaagaagatgggcgaaagcgtgcccaccgatgcc
acagaggactcggataaaaacagcgaaaccagttcgttccgccaatggcttgttgcgcag
ggcgcgatgaagttcagcgatcagacaggtgactgttttgatgaaaaaggctggttcaag
gccaatgacttttacgcttatctgaaaaaggagggctacaaggtcactgaactggagaac
agcgcaactttgaccagttggggaaagcaccttcagcaactggtcttcaagaaaagcgtg
cgtggcaaagtccgactgttcgataacagccctcaggctcaatttgtccgctgcctgacc
cctccccagccaagcattcacggtgaggtgaagctggaaggtccgaaaatgactgccgcc
gaaggttttcagatgtcggccaacatgggcttgagcctcgaccttgcccgcggcgaagtg
cagttgatgaaagtcgacatgcccgccaaggaaagcgccaaagacatcaccttggattac
ctcctggacggcaaagcccagaaaatgagtttcggccgattctcctttcactttggtgta
aaggcctggggctacgccggcgcctcgctgttgctggccggtagcgtcgagttgaaccct
atcctcggcaacgtcaaatacggagcaaccctcagccccgtcaaacgcgcacagcgcgaa
gacgcctcggccaaagaagaacgtgcagatcacgatgccgccaagaaggccaaggccgac
agcggtgataacagccctactcccgaccttgaacacaaatcaacgtccggtacctatgtc
gataccaaaagcacaggccaggtgctcaccggcaaaaaagccaatgtgcaaattgaaaac
ggggcaaaggccaccttcaacgttttcggaggtctgcaagcggccatcgagctcaccggc
gcattgaactgggcgccacccaaagacctcgtcgcactgcgcaccgcacccaccatgggt
atcggcagcgataaagacgcgaagaaaaccaacccatggctgaccctcgccaagctgagt
ggctctgtcggggttgcgctgggtgctgggttccagggaactgcgcagatatccctcgat
aacggacgctttattctcaacctgaaagcagcagtggtactggggcctggtgctaacggc
agctttaagttcgagattgggtatgaggcggtggttgacatcatcaacttgtatcgaaaa
gaactgcataaaaccaaaggccgtaaagtcgaatggatggcccctgaagcgagcgaatat
gcttcagcgcttaacgcattgggcgctgctggattgaatgtggcgatggcgtacatgatg
cgttgggatgttgtgatgagtctgtatgaagcgttgactcggagtggcaagggggggccg
attgcggacacaatcatgtattacagtgacaaaaaagctcttgaggaatggtgcatcaat
gccattccggatgctctagggcccttgttcagaaccttaattagcactccggaagcgttc
actatcactgcggcatcaggaactaatggagtagctgatgaaaagcgggtgtacaaccaa
gctgaggctcacgttctgcaacaaaaagccattgaacgaattcttgattggatcgttacc
aacgcaaaaaaaacgaacactatcgacaaagcacaaagtcagtttgagtttgcgtgcatg
tctatgaacgaattcggcataaaagataaaaacgcaaaaatgtcttactgcaaaaatcgg
atgctactggatagcttcatgtccgaaagcgtacgcgcactcttcgatgacaccagcgtt
gaagcccgaaagcactacaagtcccatgtaaaactacttggcgccaattctgccgaattc
tgcgaacaaaactatattccgcaccccaactactctcctagcggcgcaacaccattttta
aagggttactaa
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