Pseudomonas sp. Stari2: NH234_17090
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Entry
NH234_17090 CDS
T10554
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
psdt Pseudomonas sp. Stari2
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdt02000
]
NH234_17090
Transporters [BR:
psdt02000
]
Other transporters
Pores ion channels [TC:
1
]
NH234_17090
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
XCX98068
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Position
3800388..3802325
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AA seq
645 aa
AA seq
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MIRPFNTPAPSLLFGCLFSPLLLADDAPLELTQQIVSAPSVESTTVADMAQFGSKVEVVT
REQIERAGPSADVTRVMQMFIPGLYVAPKNGPFDYGTYSLLGGRNDDTLILLDGVRLNNR
LYGGLYLDTLPANAIERIEVLKGGQSLLFGTQAVSGVINIVTRSPQSRKASGEVNMGVDT
FGGTTEDARVENIFTNGFGDLGLLAYVSHNVSDGYQPFRNRDIKNDSEKKRAYEVTTFGG
KAIQSFGDDARLELFYQYADANLDFARPVDNHKTTNDRIQQIATATFEQNVNERLSYFVK
GHINDWDTRYTRINNTSDGGVKTINHNDYWGFTDWGVQAEGKAELPGGHVLVFGTDNQWF
KGQDDVLIIDNDKAEAHALYTQMRPQIDALPDWHPSIGIRHEAMSGGDSATIGMLTSLYD
LNEHWALRGQYGTAYKLPNAEQLFVNEPGDELGNRNLKPEKSRNAELGLDYKGLLLDREF
SASVTLFKRKIDDLITLDDIQWVNGQGRIQMRGFEADAKLALNAQWSLQADMTRNLTESR
AGVTLNDVPSFFARSRIGYESVDRMWGAGSAIRYIRDVISSKQVEYGHYSVVDADAYRYL
DGAHQHRLSLLVENLFDRDYVTSRSSNVDNLGRPFTSEVRYTYRF
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgattcgacctttcaacactccggctccatccctgttgttcggctgcctgttcagcccc
ctgctgctggcggatgatgcaccgctcgaactcacccagcaaatcgtttccgcgccgtcg
gtggagtccaccacggtggcggacatggcgcagttcggcagcaaggtcgaggtcgtcacc
cgtgagcagatcgaacgcgccggccccagcgccgatgtcacccgcgtcatgcagatgttc
attcccggcctgtacgtcgcgccgaaaaacggcccgttcgactacggcacctattcgctg
ctgggtgggcgcaacgatgacacgctgatcctgctcgacggcgtgcgcctgaacaatcgc
ctgtacggcggcctgtatctggacaccctgccggccaacgccatcgaacgcatcgaagtg
ctcaagggtgggcaaagtctgttgttcggcacccaggccgtgtccggcgtgatcaacatc
gtcactcgtagcccgcaaagtcgcaaagcctccggcgaagtgaacatgggcgtggataca
ttcggcggcaccaccgaggatgcgcgggtcgagaacatcttcaccaacggtttcggcgac
ctgggcttgctggcctacgtcagccataacgtctcggacggctatcagccgtttcgcaat
cgcgacatcaagaacgacagcgaaaagaagcgcgcctacgaagtcaccaccttcggcggc
aaggcgattcagtcctttggcgatgacgcgcgcctggaactgttctaccagtacgctgac
gccaacctcgacttcgcccgcccggtggacaaccacaagaccaccaacgaccgtatccag
cagatcgccacggcgacctttgaacagaacgtcaacgaacgcctgagctacttcgtcaaa
ggccatatcaacgactgggatacccgctacacgcgcatcaacaacacgtccgatggcggt
gtaaaaaccatcaaccacaacgactattggggcttcaccgactggggtgtgcaggccgaa
ggcaaggccgaattgcccggcggccatgtgctggtgttcggcacggacaaccaatggttc
aagggccaggacgatgtgctgatcatcgacaatgacaaggctgaagcccacgcgctctat
actcaaatgcgcccgcagatcgacgccctgcccgactggcatccgagcatcggtattcgt
cacgaagccatgagcggcggcgacagcgcaacgatcggcatgctcacttcgttgtatgac
ctcaatgaacactgggcactgcgcggccagtacggcaccgcctacaaactgccgaacgcc
gagcaactgttcgtcaacgaaccgggcgacgagttgggcaaccgcaacctgaaaccagag
aaaagtcgcaacgccgaactcggcctcgactacaaaggcttgctgctcgatcgcgagttc
agcgccagcgtcaccctgttcaaacgcaagatcgatgacctgattactctcgacgacatt
cagtgggtcaatggccaggggcggatacagatgcgtggtttcgaggcggacgcaaaactg
gcgctcaacgcgcaatggagcctgcaagcggacatgacccgcaacctcaccgagtcgcgt
gccggcgtcacactcaacgatgttccgagcttcttcgctcgttcccgcatcggttacgag
tcggttgaccggatgtggggcgccggcagtgcgatccgctatatccgcgatgtgatcagc
tcgaagcaggtcgagtacggccattactccgtggtggatgccgacgcttatcgctatctc
gacggtgcccatcagcatcgcctgagcctgctggtggaaaacctgttcgaccgcgactac
gtcaccagccgttcgagcaacgtcgacaacctcggacggccgttcacctccgaagtgcgc
tacacgtaccgtttctga
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