Pseudomonas sp. Stari2: NH234_17410
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Entry
NH234_17410 CDS
T10554
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psdt Pseudomonas sp. Stari2
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psdt03400
]
NH234_17410
DNA repair and recombination proteins [BR:
psdt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NH234_17410
Archaeal homologous recombinant proteins
NH234_17410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
nSTAND3
MMR_HSR1
RsgA_GTPase
cobW
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XCX98130
LinkDB
All DBs
Position
3859879..3863520
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGEGFAEVDFVGVDGRRYRARWEANRAREKA
GGKLQTSRQSLRDIDQDQLLASQKGEYKVQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKQLQDQATGVTPLPPEARAELDERF
NAAQQQLKLQQAQLKQIEQQHDWLKELLRLQDSQQAAAEQLRSAEHERESLAGERLKLTR
LEQLAPQRHQFARKTELDAQLTPLAAQIHAHTQQQGELAERQTRLEQDLAAAQIALTQAQ
AQQSESAPLLRQAFEEQSTLARLAKDVASGTEAKQSAEQACTQGQSTIQTLLDQQKQVAE
RLQRIAADLEQSAQLAPLSEAWNAYRDRLQQLMLIGNRLNKGESELANLQQNAARATEEL
ATQKQQLEVLFKEAGAEPDAVAEQIGILGTLLQDNRKQLRAVEDLARLWASQQDLDKRSA
ELQQRQLDAQQERERLTQDGVKTKSELIVAEQTFNVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSNEHPYHQPEALLQSLGRHDESEQASAQQAVDQLKEKLTELRTSVGGVIAQ
QKELLQQQEQLAAQQQALTPSIESHPLAAQLLNQDSDKRAAWLTRQNDQLNQSITQDEQR
QTALLTLQKDAARLTQQLRHAETAHQQATQHLSNQQRELSADRQRLDEELAAFATLLPSE
THEALRAEPAATFMQLDRQIAERLAQVDQQKDELAEQQQRQQTLEKEQDRQQSRVQQLQN
AEQQLNALTAQQQASQEKLAQLLGAHNCAEHWQQQLEQAVEQARNAESTKTQALQAVRTQ
LVQIAAELKAQQERLQALETEDRDLAGKIADWRARHPELDDGGLEDLLRVDDAQVGELRE
RLQRNEKALEHAKVLLQERDRQLLEHQAQHNGDLEAEQLVTALADLQNQCGVSEQLCAEL
RAEQVEDQRRQNANAALAQQIADAYAEYQRWARLNALIGSATGDTFRKIAQAYNLDLLVH
HANAQLRQLVKRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
QRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccattcgtttgaagaaccttgcctcgctagccggcccgttcgagatc
gatttcaccgccgaaccgctggccagtgccggtctgttcgccatcaccggccccaccggt
gccggcaaaagtaccttgctcgatgccttgtgcctggcgctgttcggcgctgtgccgcgt
ctgaacaacaccgggcgtgacgccaaggtcccggacgccgacggtgaaatcgccaccggc
gacccgcgtaccctgctgcgtcgtggtacaggcgaagggtttgccgaagtggattttgtc
ggtgtcgatggccgccgctatcgcgctcgctgggaagccaaccgcgcccgggaaaaggct
ggcggcaagttgcagaccagccgccagagcctgcgcgacatcgatcaggatcaactgctc
gccagccagaaaggcgagtacaaggttcagctcgaagccgcgctgggcctgaacttcgaa
cagttcacccgcgccgtgctgctggcccagagtgagttcagtgcgttcctcaaggccgat
gacaacgaccgcagcgaactgctggaaaaactcaccgacacggcgctctacacccgcctc
ggccgccgcgcgttcgacaagaccaaagaggctcgcgaagcccacaagcagctgcaggat
caggctaccggcgtgaccccgctgccgcccgaggcccgtgccgaactcgacgaacgcttc
aacgctgcccagcagcaattgaagttgcagcaggcgcagctcaaacagatcgagcaacag
cacgactggctcaaggaactgctgcgactgcaagactcgcaacaagccgccgccgaacag
ctgcgcagcgccgagcacgagcgagagtcgctggccggtgagcgtctgaagctcacccgc
ctggaacagctcgccccgcaacggcaccagttcgcccgtaaaaccgaactggatgcacag
ctgacgccactcgctgcgcagatccacgcgcacacccaacagcaaggcgaactggctgag
cgccagacgcgactggaacaggatctcgccgcagcgcagatcgccctgacccaggcgcaa
gcgcagcaaagcgaaagcgcaccgctgttgcgtcaggccttcgaagagcaaagcaccctc
gcccgcctcgccaaggatgtcgcgtccggcaccgaagcgaagcaatccgccgaacaagcc
tgcacccagggccagagcacaatccagaccttgctcgatcagcagaaacaggtcgccgaa
cgcttgcagcgcattgccgccgatcttgagcagagcgctcaattggcaccgttgagcgaa
gcctggaatgcctaccgcgaccgcttgcagcaactgatgctgatcggcaaccggttgaac
aagggcgagagcgaactggcgaatctccaacagaacgccgcccgagcaaccgaagaactc
gccacacaaaagcagcagctggaagtgctgttcaaggaggctggcgcggagccggacgcc
gtcgccgagcagatcggcatcctcggcaccctgctacaggacaaccgcaaacaactgcgc
gcggtagaagacctggcgcgcctgtgggccagtcagcaggacctggacaagcgcagtgcc
gagttgcaacagcgtcagctcgatgcgcaacaggagcgcgagcgcctgacccaggacggg
gtgaaaaccaaatctgaactgatcgtcgccgaacagaccttcaacgtcacccgtgaactg
ctcgaacgtcagcgtctggcccgcagtgccagcgtcgaagagctgcgtgcgcagttgcag
gacgaccagccgtgcccggtctgcggcagcaacgaacatccatatcaccagccggaagct
cttctgcaaagcctcggccgtcacgatgaaagcgagcaggccagcgcgcagcaagcggtc
gatcaactgaaggaaaaactcaccgaactgcgtaccagcgtcggtggcgtgattgcccaa
cagaaagagttgctgcaacagcaggaacaactggcggcacaacagcaagcactgacgccg
agcatcgagtctcatccgctggccgcgcaattattgaatcaggacagcgacaagcgcgcg
gcctggctgacgcgccagaacgatcaactgaaccagagcatcacccaggacgaacagcgc
cagaccgccctgcttaccttgcaaaaggacgcggcgcgtctgacccagcaattgcgtcac
gctgaaaccgcacaccagcaagcaacgcagcacctgagcaatcagcagcgcgagttgagc
gctgaccgtcaacgtctggacgaagagctcgcagccttcgccacactgctgccctccgag
acgcacgaagccctgcgcgccgaaccggccgcgaccttcatgcagcttgaccggcagatc
gccgagcgtctggcgcaagttgatcagcaaaaagacgaactggccgaacagcaacaacgc
cagcagacgcttgagaaggaacaggatcgccagcaaagccgcgtgcagcaactgcaaaac
gctgaacagcagctcaacgcactgaccgctcagcaacaggccagccaggagaaactggcg
caattgctgggcgctcacaactgcgccgaacactggcagcagcagctggagcaggctgtg
gaacaggcgcgcaacgccgaatccaccaagactcaggcgctgcaagccgtacgcacgcag
cttgtgcaaatcgccgccgaactcaaagcgcagcaggagcgtttgcaggcgctggaaacc
gaagatcgcgatctggccggcaaaattgccgactggcgcgctcgtcacccggaactggat
gacggcggtctcgaagatctgttgcgggtcgacgacgcgcaggtcggcgagctgcgcgag
cgtttgcagcgcaacgaaaaggccctggaacacgccaaagtgctgttgcaggagcgcgat
cgccagttgcttgaacatcaggcacaacacaacggcgacctcgaagccgagcaacttgtc
actgccctcgccgacctgcagaaccagtgcggcgtcagtgaacagctctgtgccgaactg
cgtgccgagcaagtcgaagatcagcgacggcagaacgccaacgccgcactggcgcagcag
atcgccgacgcctatgccgagtatcagcgctgggcgcgcctcaatgccttgatcggttcg
gccaccggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcat
cacgccaacgcgcaactgcgccaactggtcaaacgctatcgcctcaagcggggcggcagc
atgctcggcctgctggtgatggacaccgagatgggcgatgaactgcgctcggtgcattcg
ctgtccggcggcgagaccttcctggtgtcgctggcccttgcattgggtctggcatcgatg
gcatcgagcacgctgaagattgaatcgctgttcatcgacgaaggctttggcagcctcgat
ccggagtccctgcaactggccatggacgccctcgacggtttgcaggctcagggtcgcaaa
gtcgcggtaatttcccacgtgcaggaaatgcacgagcggattccggtacagattcaggta
cagcgccagggcaatggtttgagcacactggaggtgaaatga
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integrated database retrieval system
