Pseudomonas sp. Stari2: NH234_18335
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Entry
NH234_18335 CDS
T10554
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NH234_18335 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psdt02044
]
NH234_18335 (tssK)
Secretion system [BR:
psdt02044
]
Type VI secretion system
Imp/Vas secretion system core components
NH234_18335 (tssK)
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
XCX98304
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Position
complement(4043575..4044906)
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AA seq
443 aa
AA seq
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MSLLPDAVCWHEGMQLLPQHFQLQGLRAEALGAHLAQACNPWFFGVSHMDFDPSAMSAGV
VRVVSLQGTMPDGLPVNLQAGVGPVLELDVGPSINETDDATVTVYLAISPLWRAGQLLPL
KGRLQSVVGEALPDLTSGEFPESITVWRPNPRLCTQLNKADSICLPLLKIRKEGGGFLPL
PYTPPTPVLLPESPLGRRIAGLCARAREKCLFLGGRLRQAQQSGNQDDALEIRRQLTALW
TRLPEVEGSLNSRIAHPQGLYVQLLGLAGAWSALDPLAGVPSFAPLDFFELQRGYEPLLD
WLETTLELIRAGYRSIAFERSEHSFSIQLPDEQPSQRLVIGLRMPNGASEQAAGEWLRGA
IIASAPHIALLSRQRMSGLTHQAMNRNEQVAYSVGDDTRLFVVTAEGNWFDAQLPLVIAA
PATRLTSSPWQVVLFVAQNSESA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctacctgatgcggtctgctggcatgaaggcatgcaattgctgccacagcat
tttcagttgcagggtctgcgggccgaagcgctcggcgcgcatctggcgcaggcgtgcaat
ccgtggttctttggggtcagccacatggatttcgacccttcggcgatgagtgccggggtg
gtacgcgtggtgtcattgcaagggacgatgcccgacgggttgccggtcaatctgcaggcg
ggtgtcgggcctgtgctggagctggatgtcggcccctcgatcaacgaaaccgacgatgcg
accgtcaccgtgtacctggcgatcagtccgctgtggcgcgccggtcaattgctgccgctc
aaggggcgattgcagtcggtggtcggcgaggctctgccggatctcaccagcggcgagttc
cccgaatcgattaccgtgtggcgacccaacccgcgtctgtgcacacagttgaacaaggct
gattcaatctgcctgccgctgctgaaaatccgcaaggagggcggcggttttctgccgttg
ccctatacgccgccgacgccggtccttttgccggagtcgccgctgggtcggcgaattgcc
gggctctgcgcgcgggcccgggagaaatgcctgttcctgggcgggcgtctgcgtcaggca
caacagtccggcaatcaggacgacgcgctggagatccgtcgccaactgaccgcgttatgg
acgcggctgccggaagtcgaaggttcgctgaacagtcgcattgctcatccgcagggtttg
tacgtgcagttgctggggttggccggcgcgtggtcggcgctggatccgttggcgggcgtg
ccgtcatttgcgccgctggattttttcgagttgcagcgcggttacgagccgctgctcgat
tggctggaaaccacgctggaactgattcgtgccggttatcgcagcatcgctttcgagcgc
agcgaacacagcttttccattcagttgccggacgagcagccgagccagcggctggtcatc
ggcctgcgcatgcccaacggcgccagcgagcaggcggccggcgagtggttgcgcggcgcg
atcattgcctcggcgccgcacatcgctttgctcagccgccagcgcatgagcggcctgacg
caccaggccatgaatcgcaacgaacaagtggcctacagcgtcggcgacgacacccgactg
tttgtggtgacagccgaaggtaactggttcgacgcgcaattgccgttggtgatcgccgcg
ccggccacccggttgaccagcagtccgtggcaagtggtgctgtttgtcgcccagaacagt
gaaagtgcctga
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