Pseudomonas sp. Stari2: NH234_20050
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Entry
NH234_20050 CDS
T10554
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00300
Lysine biosynthesis
psdt00470
D-Amino acid metabolism
psdt01100
Metabolic pathways
psdt01110
Biosynthesis of secondary metabolites
psdt01120
Microbial metabolism in diverse environments
psdt01230
Biosynthesis of amino acids
Module
psdt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NH234_20050
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NH234_20050
Enzymes [BR:
psdt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NH234_20050
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
SIP
Motif
Other DBs
NCBI-ProteinID:
XCX98635
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Position
complement(4405218..4406210)
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AA seq
330 aa
AA seq
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MTQFYDARGNIYGVISPRALRESGIDLPTDAAQCALSRQAWSRAAITLCCDWSDDQRPAG
SKSHRSDGLLIGPFQSSPPFDMLIVNTDGTLAERSGNGLTIFSQALLEQGLMPEEGASLQ
VHHDKLDASSPVPVAVKPAEVAGVQGFWLELGKPGFGPAAVGAVGVEPVQFNNVEVSRVR
PLAQLDPAWEHSQFVRIGNPHCVTLVQDEAALPSNAQMLESPLADSLTAIAFAMPVGAGQ
PCPAGVNLQWAMRAGDQRIAARVFERGEGPTASSGTSASAVACAAWRVGWVSAGEVQVVM
PGGTAPVLLEEQGGDLTGVRLFGTAHQTKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagttctacgatgcacggggcaatatctacggagtgatttcacccagggcgctg
cgggagtcgggcatcgacctgcccaccgatgccgcgcaatgtgccttgtcccgacaggcg
tggagccgcgccgcgatcaccctgtgttgcgactggtccgacgatcagcgacctgccggc
agcaagtcccaccgcagcgatggcttgctgatcggcccgtttcaatcctcgcctcctttc
gatatgctgatcgtcaataccgatggcacgctggccgagcgcagtggcaacggcttgacg
attttctctcaggcactgcttgagcaagggctgatgccggaagagggcgcatcgttgcag
gtgcatcacgacaagctggatgcgtcatcgccggtgcccgttgccgtcaaaccggctgag
gtggcgggtgtacaaggcttctggctggaactcgggaaacccggattcggtccggcagcc
gtcggtgcagtcggcgttgaacccgtgcagttcaacaacgtggaagtcagccgcgtccgg
ccattggcgcaactcgatcctgcctgggagcacagccagttcgtgcgcatcggcaatccc
cattgcgtgacgctggtgcaggacgaagccgcactgccgagcaacgcgcagatgcttgag
tcgccgctggccgacagcctgaccgccatcgccttcgccatgcccgtcggcgccggccag
ccgtgcccggccggggtcaatctgcaatgggcgatgcgcgccggcgatcaacgcatcgcc
gcacgagtattcgaacggggcgaaggcccgacggcgtcttccggcaccagcgccagtgca
gtggcgtgtgcggcgtggcgggtaggctgggtgtcggcaggtgaggtgcaggtggtcatg
ccgggcgggacggcaccggtattactggaggaacagggcggtgatctgaccggcgtgcgc
ctgttcggcaccgcgcatcagacaaaaaggtga
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