Pseudomonas sp. Stari2: NH234_20460
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Entry
NH234_20460 CDS
T10554
Name
(GenBank) DEAD/DEAH box helicase
Organism
psdt Pseudomonas sp. Stari2
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
XCX98713
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Position
4495487..4498177
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AA seq
896 aa
AA seq
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MSPPLSKPLASSWVSRFKEQSLERGRRYALENRVRIVQVGDATITASCEGSGGNIYRQTI
HLRESAKGTLLMVDATCTCPVHSNCKHCAAVLLQVQETLEYPAAAKDAELLEKLQAALEN
RSPKAPPQVLVDNVQPVPRLWLASVEFSAFEPRNGKMQRYIQHRAALSFSYLDEYVSGQK
NSDILIRQEAQTLRVKRHPDVEQSYREQLRILGFRIATRQSKALPESAGELYEMVNDSAW
LTFTLNDLPKLRTQGWELQIDEEFGFDLTAVDDWYATVEQTPERDWFDLELGIIVNGERL
SLLPILLNLMRSHTEILNPERLARRRDDELILVNIPQRNSEHGPLQVALPLGRLKPVLAT
LGEFYLQEPGETTLRLSKADATRLNTLEGIPLLWEGGEQIRSFAQRLRDIRDYSAEAPEG
LNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKNAGRLDRPCMVV
MPTSLIPNWLDEAAHFTPQLKVIALYGASRKKHFEHLADYDLILTTYALLPKDVERLAKQ
PLHVLVLDEAQYIKNPNSKAAQAARELNARQRLCLSGTPLENHLGELWSLFHFLLPGWLG
DVKSFNADYRVPIEKRASEVRLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVDLNEA
QRDMYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDATLPARGST
SGKLDSLMEMLEELFEEGRRILLFSQFTSMLSLIEDELKKRNVPYALLTGQTRDRRTPVK
EFQSGKRQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIGQEKPVFVY
KMIARGTVEEKIQLLQREKSDLAAGVLDGRKAGDWKLQSDDIEALFAPLPDKFEKR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgcctctgagtaaaccgctggcctcttcctgggtcagccgattcaaggaacaa
agcctggagcgtggccgccgctacgcgctggagaaccgggtgcggatcgtgcaggtcggc
gatgcgaccattaccgccagttgcgaaggctctggcggcaacatttatcgtcagacgatt
catctgcgcgagtcggccaaaggcacactgctgatggtcgacgccacgtgcacctgcccg
gtccacagcaactgcaaacactgtgcggcggtcttgctgcaggtgcaggaaactctcgaa
taccctgccgctgccaaagacgccgaactgctggaaaaactccaggctgctctggaaaac
cgcagccccaaggcgccgccacaagtgctggtggacaatgtgcagccggtgccgcgcctg
tggctggccagcgtcgagttcagcgcgttcgagccgcgcaacggcaagatgcagcgctat
atccagcatcgtgcggcgctgtctttcagctacctcgacgaatacgtcagcggccagaaa
aacagcgacatcctgattcgccaggaagcacagactctgcgtgtcaaacgccatcctgac
gtagagcaaagctaccgcgaacaattgcggattctcggcttccgcatcgccacgagacag
agtaaagccctgccggaaagcgccggtgaactctatgagatggtcaacgacagcgcgtgg
ctgacattcactctcaacgatctgccaaagctgcgcacccaaggttgggaattgcagatc
gacgaagaattcggcttcgatctgacggccgtcgacgactggtacgccaccgtcgaacaa
accccggaacgcgactggttcgatcttgagttgggcatcatcgtcaatggcgagcgcctg
agcctgctgccgatcctgctcaacctgatgcgctcgcacactgaaatcctcaaccccgaa
cgccttgcccggcgacgggatgacgagttgattctggtgaacatcccgcaacgcaacagc
gagcatggccccttgcaggtcgccctacccctcggccggttgaaaccggtgctggcaacg
ttgggcgagttctatctgcaagagccgggcgaaaccaccctgcgcctgagcaaggctgac
gccacccgtctcaacacgctggaaggcatccccctgctatgggagggcggcgagcagatt
cgcagtttcgcccaacgcctgcgcgatatccgcgactacagcgccgaggcgccggaagga
ctgaacgcgacactgcggccttatcagctcgaaggcttgagctggatgcagtcgctgcgg
caacttgaggtcggcgggattcttgcggacgacatgggactgggcaaaaccctacagacc
ctggcgcacattctcagcgagaaaaacgccggacgcctggaccggccgtgcatggtggtg
atgcccaccagcctgatccccaattggctggacgaagcggcgcacttcacgccccagctc
aaagtgattgctctgtacggtgccagccgcaaaaagcattttgagcatctggccgattac
gacctgatcctcacgacctatgcgctgctacccaaggatgtcgagcgcctggcaaagcag
ccattgcatgtattggtgctggatgaggcacagtacatcaagaacccgaacagcaaagcc
gcccaggcggctcgtgaactgaacgcccgccaacgtctgtgcctcagcggtacgccgctg
gaaaaccacctgggcgaactgtggtcactgtttcacttcctgctgcccggctggctcggc
gacgttaaaagtttcaacgccgattaccgtgtgccgatcgaaaaacgcgccagcgaagtc
agacttcagcacctcaacggtcggatcaaaccgtttctgctgcgccgcaccaaggaacag
gtcgcgaccgagctgccgccgaaaaccgagatcatccactgggtcgatctcaacgaggcc
cagcgcgacatgtacgaaaccatgcgcctggccatggacaagaaggttcgcgacgagatc
acccgcaaaggcgtggcacgcagtcagatcatcattctcgaagcgctgctcaagctgcgt
caggtctgctgcgatctgcgtctggtcaatgacgccaccctgcccgcgcgcggcagcacc
tcgggcaaactcgacagcctgatggaaatgctcgaggagctgtttgaggaggggcgacgg
atcctgctgttttcgcagttcacttcgatgctgtcactgatcgaggatgaactgaaaaag
cgcaatgtcccctatgcgttgctgaccgggcaaacccgggatcggcgcacaccggtgaag
gaattccagagcggcaaacgtcagatctttctcatcagcctgaaggccggtggcgttggt
ctgaacctgacggaagcggataccgtgattcactacgatccatggtggaacccggcgacc
gaaaatcaggcaaccgaccgtgcgtatcgcattggtcaggagaagccggtattcgtctac
aagatgattgcccggggcacggttgaagagaaaattcagcttctgcaacgggaaaaatcc
gacctggcggccggtgtgctagatgggcgcaaggccggggactggaagttgcagagtgat
gatatcgaggcgctgtttgcgccgttgccggacaagtttgaaaagcgctga
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