Pseudomonas sp. Stari2: NH234_21125
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Entry
NH234_21125 CDS
T10554
Name
(GenBank) response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt02020
Two-component system
psdt02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NH234_21125
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NH234_21125
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psdt01001
]
NH234_21125
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psdt02022
]
NH234_21125
Enzymes [BR:
psdt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
NH234_21125
Protein kinases [BR:
psdt01001
]
Histidine kinases
Other
NH234_21125
Two-component system [BR:
psdt02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
NH234_21125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
IFT57
HATPase_c_2
PDE8A_N
Receiver_CRE1
Motif
Other DBs
NCBI-ProteinID:
XCX98837
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Position
4648222..4650543
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AA seq
773 aa
AA seq
DB search
MDIKFTHRLSYKQARLTVLVGFILGTLLSLLQIGIDYASEDASINREILSLLEISHNPAS
RIAYNIDAELAQELTLGLLRSPAIISAQLTDNNQTVLASVKRPELQSGYRLISDFLFGAK
REFEDRLYLDHLPNESLGTLSLEVDTYAFGSRFLRRAEVTLLNGFARSLILTGILLALFY
VMLTKPLVRVIRELSGRDPRSAEPTTLECPSGHANDEIGVLVKVANQQFENIATEIQQRR
TAENRLTDYLAQLEDIVSARTAELKAINARLSQSNEELEVARSTALDMAEARSAFLANMS
HEIRTPLNGLLGMIALSLDGPLNGEQQQQLSIAHDSGKVLVELLNDILDLSKFDAGQLEL
EQIPFDLGSLIEDTANLLSQNAAPSVELTCLIDPHFPALVLGDPTRVRQIVSNLLSNALK
FTRFGRVDVRLSTWKDGVRIEVCDTGIGIAQEAQVKIFQPFTQAGAGITRQYGGTGLGLA
LTYNLCEAMEGRLTISSEVGFGSQFCAELPLPCHTRAVIPAQLHGSVLAITTAASGLSEL
LSSLLPVWGLSYEQRTIEASLLGPSPDIIITDCPECLFGLRPTMTAPILLVTAYGSFLPG
EEAAALAPLQQQARPLARNALYQNLRRTLQPDITTIDRGRLESVPSQRRGRVLLVEDNPV
NQLVAKGMLGKLGCEVVVAAHGAEALDQLEYHEFDLVLMDCNMPVMDGYEASRQIRQSGR
WPHLPIVALTANAMSEERERCRAAGMSDYLAKPFRREELAALLDQWIPTTTTL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaattcacccaccggctgtcgtacaaacaggcccggcttaccgtgctggtc
gggttcattctgggcacgctgctcagcctgctgcaaatcggcatcgattatgccagtgaa
gacgcgtccatcaaccgtgaaatcctgtctttgctggaaatcagccataacccggcctcg
cgtatcgcctataacatcgatgccgagctggcccaggaactcacgctgggcctgctgcgc
tcgccggccatcatttccgcacaactgaccgacaacaatcagacggtactggccagcgtg
aagcgcccggagctgcaaagcggctatcggttgatcagcgacttcctgttcggcgccaaa
cgcgagttcgaagatcggctctatctcgaccacttgcccaacgaatccctcggtaccctg
agcctggaagtcgacacctatgccttcggcagccgcttcctgcgtcgggccgaagtcacg
ctgctcaatggttttgcccgcagcctgattctgaccggcatcctgctggcactgttctac
gtgatgctgaccaagccgctggtgcgggtgatccgtgaactcagcgggcgcgatccgcgc
agtgccgaaccgaccactcttgaatgtccgagtggccacgccaacgacgagatcggcgtg
ctggtgaaggtcgccaaccagcagttcgagaacatcgccacggaaatccagcaacggcgc
accgcggaaaaccgcctcaccgactacctcgcccaactcgaagatatcgtgtcggcgcgc
accgccgaactcaaagcgatcaacgcccgcctcagccagtccaacgaagaactggaggtc
gctcgcagcactgcactggacatggccgaagcgcgctcagcgttccttgccaacatgagc
cacgagatccgcaccccgctcaacggcctgctgggcatgatcgcgctgtccctcgacggc
ccgctcaatggcgaacaacagcaacaactgtccattgcccacgactcgggcaaagtgctg
gtggagttgctcaacgatattctcgacctgtcgaaattcgatgccgggcaactggagctg
gaacagatcccgttcgacctcggctcgctgatcgaagacaccgccaacctgctttcgcag
aatgcggcaccgagtgtcgagctgacgtgcctgatcgatccgcactttccggcgctggtg
ctcggcgacccgacacgggtcaggcagatcgtcagtaacctgctgtccaacgccctgaag
ttcacccgttttggtcgggtcgatgtgcgtttgtcgacctggaaggatggcgtgcgcatc
gaggtatgcgataccggcatcggcattgcccaggaggcccaggtcaagattttccagccg
ttcacgcaggccggggccggtattacccgccagtacggcggcaccggactgggcctggcg
ctgacctacaacctgtgcgaagccatggaggggcgactgacgatcagctccgaagtcggt
ttcggcagccagttctgtgccgaactgccactgccctgccacacccgcgcggtcattccg
gcacaactgcatggcagcgtgcttgccatcaccacggcggccagcggcctgtcagagctg
ctgagcagtctgttgccggtctggggcctgtcgtacgaacagcgcacgattgaagcgtca
ctgctcggcccgtcaccggacatcatcatcacggattgccccgaatgcctgttcggcctg
cggccgaccatgaccgcaccgattctgctggtgacggcttacggcagttttctgccgggc
gaagaagccgccgccctcgccccgctgcaacagcaggctcgccccctggctcgcaatgcg
ctgtatcagaatctgcgcagaaccctgcaaccggacatcaccaccatcgaccgcgggcgg
cttgaaagcgtgccgtcacagcgtcgcgggcgagtgttgctggtggaagacaacccggtc
aaccaactggtggccaagggcatgctgggtaaactcggttgcgaagtggtggtggcggcc
catggcgcagaagcgctggatcaactggaataccacgagttcgatctggtgctgatggac
tgcaacatgccggtgatggatggctacgaagcgagccggcaaatccgtcagagcggccgc
tggccgcacctgccgatcgtggcgttgacggccaacgccatgtctgaagaacgcgaacgc
tgccgggctgctggtatgagtgactatctggccaaaccatttcgtcgcgaagaactggcc
gcactgctggatcagtggataccgactacgacaacgctttga
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