Pseudomonas sp. Stari2: NH234_21595
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Entry
NH234_21595 CDS
T10554
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
psdt Pseudomonas sp. Stari2
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psdt03032
]
NH234_21595 (ihfB)
03036 Chromosome and associated proteins [BR:
psdt03036
]
NH234_21595 (ihfB)
03400 DNA repair and recombination proteins [BR:
psdt03400
]
NH234_21595 (ihfB)
DNA replication proteins [BR:
psdt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NH234_21595 (ihfB)
Chromosome and associated proteins [BR:
psdt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NH234_21595 (ihfB)
DNA repair and recombination proteins [BR:
psdt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NH234_21595 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
XCX98925
LinkDB
All DBs
Position
complement(4743693..4743989)
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEEEEGL
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctgctctcatccaag
gatgtggagttggccatcaagaccatgctcgaacaaatgtcccaatgcctggctacgggt
gatcgcatcgagatccgtggctttggcagcttctccctgcactatcgtgccccgcgggtc
gggcgcaatccaaaaactggtcaatctgtcagtcttgacggcaagttcgttccgcatttc
aagccgggaaaggaattgcgtgatcgggtgaacgaggaagaggaggaggggctttga
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