KEGG   Pseudomonas sp. Stari2: NH234_22275
Entry
NH234_22275       CDS       T10554                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
psdt  Pseudomonas sp. Stari2
Pathway
psdt00061  Fatty acid biosynthesis
psdt00071  Fatty acid degradation
psdt01100  Metabolic pathways
psdt01212  Fatty acid metabolism
psdt02024  Quorum sensing
psdt04146  Peroxisome
Module
psdt_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:psdt00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    NH234_22275
   00071 Fatty acid degradation
    NH234_22275
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    NH234_22275
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NH234_22275
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:psdt01004]
    NH234_22275
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psdt04147]
    NH234_22275
Enzymes [BR:psdt01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     NH234_22275
Lipid biosynthesis proteins [BR:psdt01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   NH234_22275
Exosome [BR:psdt04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   NH234_22275
  Exosomal proteins of breast cancer cells
   NH234_22275
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 AMP-binding_C
Other DBs
NCBI-ProteinID: XCX99050
LinkDB
Position
complement(4883869..4885524)
AA seq 551 aa
MSAAFRLPLDVFYEREARHPRQRFLVQPVGGGQVETLTWADVGHQARCAAHWLRSRELPQ
GSHIALISKNCAHWIIVDLAIWMAGHVSVPLYPNLTADSVNQVLTHSESVLAFIGKLDDW
PGMSVGVPADLPTISLPLHPPGEFDFNWGDLQRYSPIQDDPRPAAEQLATIIYTSGTTGL
PKGVMHSFANLGFATTRGTQLFGLNENDRLLSYLPLCHVAERMFVELASIYTGQTVFFAE
SLDTFLDDLRRARPTAMFGVPRIWTKFQMGVYSKIPAKRLDFLLGLPFIGKRIGHKVLAG
LGLDALRVALSGAAPVPLTLLRWYQKLGLDVLEVYGMTESCGYSHICLPGQYKEGWIGRP
CPDVEVRIDESGEVQVRSQANMLGYFKEPQKTAETLTVDGFLRTGDKGEQDAEGRLRLTG
RLKEIFKTSKGKYVAPAPIENRLAVHTRIEQVCVVGDGLSAPLGLCVISAAGHEDARPQL
HSSLEKLLEEVNAVLDKHERLRRLVVVKDSWAVENGFLTPTLKIKRNVIEDTYGARFEEW
SERSEAVLWQD
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgtctgctgcttttcgattaccgctggacgtgttctacgaacgcgaggcccggcacccg
cgccaacgctttctggtgcaacccgtcggcggtgggcaggtcgagacgctgacctgggcc
gacgtcggccatcaggcccgctgcgccgcgcactggctgcgctcccgggagttgccccag
ggcagccacatcgcgctgatctcgaaaaactgcgcccactggatcatcgtcgacctggcg
atctggatggccggccatgtttcggtgccgctctatcccaatctcacagccgactcggtc
aatcaggtcctcactcattcggaaagcgtgctggcgttcatcggcaaactggatgactgg
ccggggatgtcggtcggggtgccggcggatctgccaaccatcagcctgccactgcaccca
ccgggcgagttcgatttcaactggggcgacctgcaacgttattcaccgatccaggacgac
ccgcgacctgccgccgagcaactggcgaccatcatttacacttccggcaccactggcctg
cccaaaggcgtgatgcacagttttgccaacctcggattcgcaacgactcgcggcacgcaa
ttgttcggcctcaatgaaaacgatcggctgctgtcctatctgccgctgtgtcatgtggcc
gaacggatgttcgtcgagctggcgtcgatctataccgggcaaaccgttttctttgccgag
agtctcgatacttttctcgacgatctgagacgggcgcggccgacggcgatgtttggcgtg
ccgaggatctggaccaaattccagatgggcgtctacagcaagatcccggcgaaacgcctg
gattttctcctcggtctgccctttataggcaaacggatcggccacaaggtgctggccggg
ttagggctggatgccctgcgcgtggcgctgtccggtgcggcgccggtgccgctgaccttg
ttgcgctggtatcagaaactcgggctcgacgtgctggaggtctacggcatgaccgagagt
tgcggctattcgcacatctgcctgccggggcaatacaaggagggctggatcggccggccg
tgtcctgacgtcgaggtgcgaatcgacgagtccggcgaagtgcaggtgcgtagccaggcc
aacatgctgggctatttcaaggaaccgcagaaaaccgccgagaccctgaccgtcgacggc
ttcctgcgcaccggcgacaagggcgaacaggacgccgagggtcgcttgcgcctgaccggg
cgactcaaggaaatcttcaagaccagtaaaggcaagtacgtcgctccggcaccgattgaa
aaccgcctcgccgtgcatacccggatcgagcaggtctgcgtggtcggcgatggtctgagc
gcaccgctgggcctgtgtgtgatctcggcagccgggcatgaagacgcacgaccgcaactg
cattcgagcctggaaaagctgctggaggaggtcaacgcggtcctcgacaagcacgaacgg
ctgcgccgtctggtggtggtcaaggacagttgggcggtggagaacggcttcctgacgccg
accctgaagatcaagcgcaacgtcatcgaagacacctacggcgcgcgcttcgaagaatgg
agcgagcgcagcgaggcggtgctgtggcaggattga

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