Pseudomonas sp. Stari2: NH234_23195
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Entry
NH234_23195 CDS
T10554
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00260
Glycine, serine and threonine metabolism
psdt00630
Glyoxylate and dicarboxylate metabolism
psdt00670
One carbon pool by folate
psdt00785
Lipoic acid metabolism
psdt01100
Metabolic pathways
psdt01110
Biosynthesis of secondary metabolites
psdt01200
Carbon metabolism
Module
psdt_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NH234_23195 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NH234_23195 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NH234_23195 (gcvP)
00670 One carbon pool by folate
NH234_23195 (gcvP)
Enzymes [BR:
psdt01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NH234_23195 (gcvP)
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Gene cluster
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XCX99221
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Position
5072362..5075214
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AA seq
950 aa
AA seq
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MTQVNLGTTNEFIARHIGPRAGDEQAMLNSLGFDSLEALSASVIPESIKGTSVLGLDDGL
SEADALAMIKGIAGKNQLFKTYIGQGYYNCHTPSPILRNLLENPAWYTAYTPYQPEISQG
RLEALLNFQTLISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKGSHQFFASIHSHPQ
TLDVLRTRAEPLGIEVVVGDERELTDVTPFFGALLQYPASNGDVFDYRELTERFHAANAL
VAVAADLLALTLLTPPGEFGADVAIGSAQRFGVPLGFGGPHAAYFSTKDAFKRDMPGRLV
GVSVDRFGKPALRLAMQTREQHIRREKATSNICTAQVLLANIASMYAVYHGPKGLTQIAN
RVHHLTAILAKGLSALGVTVEQASFFDTLTLATGAQTAALHDKARAQQINLRVIDAQRLG
LSVDETTTQADIETLWGLFTDGKTLPDFAALAAAAQSTIPAALVRQSPILSHPVFNRYHS
ETELMRYLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEFGALHPFAPAEQSAG
YQQLTDELEAMLCAATGYDAISLQPNAGSQGEYAGLLAIRAYHQSRGEDRRDICLIPSSA
HGTNPATANMAGMRVVVTACDARGNVDIEDLRAKAIEHREHLAALMITYPSTHGVFEEGI
REICGIIHDNGGQVYIDGANMNAMVGLCAPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPI
GVKSHLTPFLPGHGHMERKAGAVCAAPFGSASILPITWMYIRMMGGAGLKRASQLAILNA
NYISRRLEEHYPVLYTGSNGLVAHECILDLRPLKDSSGISVDDVAKRLIDFGFHAPTMSF
PVAGTLMIEPTESESKEELDRFCDAMIRIREEIRAVENGTLDKDDNPLKNAPHTAAELVG
EWTHPYSREQAVYPVASLVEGKYWPPVGRVDNVFGDRNLVCACPSIESYA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagtaaatctcggcaccaccaacgaattcattgcccgtcacatcggcccgcgc
gccggtgacgagcaagccatgctcaacagcctcggcttcgactcgctcgaagccctgagc
gccagcgtcatcccggaaagcatcaagggcaccagcgtgctcggtctggacgacggcctg
agcgaagccgatgccttggcgatgatcaaaggcatcgccggcaagaaccagctgttcaag
acctacatcggccagggctactacaactgccatacgccgtcgccgatcctgcgcaacctg
ctggaaaacccggcctggtacaccgcttacaccccataccagccggaaatttcccagggc
cgtctcgaagcgctgctgaacttccagaccctgatcagcgacctcaccggcctgccgatc
gccaatgcctccttgctcgatgaagccaccgccgctgccgaagccatgaccttctgcaaa
cgcctgagcaagaacaagggcagtcaccagttcttcgcctcgatccacagccacccgcaa
accctcgacgtgctgcgcacccgtgccgagccgctgggcattgaagtagtggtgggcgac
gagcgtgaactgaccgacgtgacgccgttcttcggcgcgctgctgcaatacccggcgagc
aacggtgatgtgttcgactaccgcgaactgaccgagcgcttccacgctgccaacgccttg
gtagccgtcgccgctgacctgctggccctgaccttgctgaccccgccgggcgaattcggc
gcggacgtggccatcggcagcgcgcaacgcttcggcgtgccgctgggcttcggtggcccg
cacgcggcttacttctccaccaaagatgcgttcaagcgcgacatgccgggccgtctggtc
ggtgtctcggttgaccgcttcggcaagccggccctgcgtctggcgatgcagacccgcgag
caacacatccgccgtgagaaagccacgtcgaacatctgcaccgcacaagtgctgctggcc
aacatcgccagcatgtacgccgtttaccatggcccgaaaggcctgacccagatcgccaac
cgtgtgcatcacctgaccgcgatcctggccaagggactgagcgccctgggcgtgaccgtc
gagcaagccagcttcttcgacaccctgaccctggccaccggcgcgcaaacggctgcgctg
cacgacaaggctcgcgcccaacagatcaacctgcgggtgatcgatgcccagcgtctgggc
ctgtcggtcgacgaaaccaccacccaggccgacatcgaaaccctgtggggtctgttcacc
gacggcaagactctgccggacttcgctgctctcgccgctgccgcgcaaagcaccattcca
gccgcactggttcgtcagtcgccgatcctcagccacccggtattcaaccgttatcactcg
gaaaccgagctgatgcgctacctgcgcaaactggcggacaaggacctggcactggatcgc
accatgatcccgctgggctcgtgcaccatgaaactcaacgccgccagcgaaatgatcccg
gtgacctgggccgaattcggtgccctgcacccattcgcccctgccgagcaaagcgccggc
tatcagcaactgaccgatgaactggaagcgatgctctgcgccgccaccggttacgacgcg
atctcgctgcagccgaacgccggttcccagggtgaatatgcaggtcttctggcgatccgt
gcctatcaccagagccgtggcgaagaccgtcgcgacatctgcctgatcccgtcgtccgcc
cacggcaccaacccggctaccgccaacatggctggcatgcgtgtggtcgtgactgcctgc
gacgcccgtggcaacgtggacatcgaagacctgcgcgccaaggccatcgagcaccgcgaa
cacctcgccgcgctgatgatcacctacccgtcgacccacggcgtgttcgaagaaggcatc
cgcgaaatctgcggcatcattcacgacaacggcggccaggtgtacatcgacggcgccaac
atgaacgcgatggtcggcctctgcgcaccgggcaagttcggcggcgacgtctcgcacctg
aacctgcacaagaccttctgcattccgcacggcggtggcggcccgggtgtcggcccgatc
ggcgtgaaatcgcacctgaccccgttcctgccgggccacggccatatggagcgcaaggca
ggcgcagtctgcgcggcgccgttcggcagcgcgagcattctgccgatcacctggatgtac
attcgcatgatgggtggcgcaggtctcaagcgcgcttcgcaactggcgatcctcaatgcc
aactacatttcccgtcgcctggaagagcactatccagtgctgtacaccggcagcaacggc
ctggtggcgcacgagtgcatcctggatctgcgtccattgaaagacagcagcggcatcagc
gtcgatgacgtggccaaacgtctgatcgacttcggcttccacgccccgaccatgtcgttc
ccggtggccggcacgctgatgatcgagccgaccgaaagtgaatccaaggaagaactggac
cgcttctgcgacgccatgatccgcatccgcgaagaaatccgcgcagtggaaaacggcacc
ctggacaaggacgacaacccgctgaagaacgctccgcacactgccgcagagctggttggc
gagtggactcacccatacagccgcgaacaagcggtgtacccggtggcatcgttggtcgaa
ggcaagtactggccgccggtcggtcgcgtcgacaacgtgttcggcgaccgcaatctggtc
tgcgcctgcccgtcgatcgaaagctacgcttga
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