Pseudomonas sp. Stari2: NH234_23280
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Entry
NH234_23280 CDS
T10554
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NH234_23280 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psdt03400
]
NH234_23280 (ruvA)
DNA repair and recombination proteins [BR:
psdt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NH234_23280 (ruvA)
RecFOR pathway proteins
NH234_23280 (ruvA)
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
IMS_HHH
Transposase_20
HHH_8
5_3_exonuc
HHH_2
Motif
Other DBs
NCBI-ProteinID:
XCX99235
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Position
complement(5088671..5089279)
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AA seq
202 aa
AA seq
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MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPLTLHTHLVVREDAQLL
YGFAGKRERDFFRELIRLNGVGPKLALALMSSLEVDELIRCVQSQDTSALTKVPGVGKKT
AERLLVELKDRFKAWETSPAMFALVPNQPDGPAPVNTAENDAVSALISLGYKPQEASKAI
SAIKEKGLSSEDMIRRALKGMI
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgattggacgcttgcgcggcaccctcgctgaaaaacagccgccgcacctgattctggat
gtaaacggcctcgggtatgagctggaagtgcccatgaccaccctgtatcgcctgccgtcg
gtcggtgaaccgctgaccttgcacacccatttggtcgtacgcgaagacgcgcagttactc
tatggtttcgctggcaaacgtgagcgagacttttttcgcgagttgatccgtctcaatggt
gtgggcccgaaactggccctggcgttgatgtcgagtctggaagtcgatgagctgatccgt
tgcgtgcagtcccaggacacttcggcgctgaccaaggtgccgggggtgggcaagaaaacc
gccgagcgtctactggtcgaactcaaggaccgcttcaaggcctgggaaacctcgccggcc
atgtttgcgctggtaccgaaccagccggacggcccggcaccggtcaataccgccgagaat
gatgcggtcagcgcgctgatttccctgggctacaagccgcaggaagcgagcaaggcgatt
tccgcgatcaaggagaaaggcttgagcagtgaagacatgatccgacgcgccctgaaggga
atgatttaa
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