Pseudomonas sp. Stari2: NH234_23960
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Entry
NH234_23960 CDS
T10554
Name
(GenBank) aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00250
Alanine, aspartate and glutamate metabolism
psdt00280
Valine, leucine and isoleucine degradation
psdt00310
Lysine degradation
psdt00410
beta-Alanine metabolism
psdt00640
Propanoate metabolism
psdt00650
Butanoate metabolism
psdt01100
Metabolic pathways
psdt01120
Microbial metabolism in diverse environments
Module
psdt_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NH234_23960
00650 Butanoate metabolism
NH234_23960
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NH234_23960
00280 Valine, leucine and isoleucine degradation
NH234_23960
00310 Lysine degradation
NH234_23960
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NH234_23960
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psdt01007
]
NH234_23960
Enzymes [BR:
psdt01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
NH234_23960
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
NH234_23960
2.6.1.48 5-aminovalerate transaminase
NH234_23960
Amino acid related enzymes [BR:
psdt01007
]
Aminotransferase (transaminase)
Class III
NH234_23960
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
DUF6819
TetR_C_37
Motif
Other DBs
NCBI-ProteinID:
XCX99364
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All DBs
Position
5229110..5230504
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AA seq
464 aa
AA seq
DB search
MSDIRIATQEDQILLEKEAKYCSYGDTVHYIEPPRIFSRCEGSYVWDTEDQAYLDLQMWY
SAVNFGYANPRLNNALKQQIDTLPQIASQYLHKGKIELSEMIAVDAKKKFGLDGRVHFNV
GGSQSIEDSLKVVRNASNGKSLMFAFEGGYHGRTLGASSITSSYRYRRRYGHFGERANFI
PFPYHFRGPKGMTKEEYGSHCVQQFARLFETEYNGVWDPKVGASEYAAFYVEPIQGTGGY
VIPPMNFYSELKHVLDQHGILMVVDEIQMGFYRTGKLWSIEHFDVKPDVIVFGKALTNGL
NPLGGIWAKEELINPKVFPPGSTHSTFASNPLGTAVGLEMFKMTSEVDYGAMVMAKGKYF
LEGLQDLQKRYPIIGDVDGLGLALRCEICAPDGFTPDKATLDFMVEEGMKGDIEIDGRKL
GLILDVGGYYKNVITLAPSLEISYPEIDLGIALLDRLLARAMKR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatattcgaatcgctacccaggaagaccagatccttctggaaaaagaagccaag
tactgctcctacggcgacaccgttcactacatcgagccgccgcgcattttcagccgctgc
gaaggctcctacgtctgggacaccgaagaccaggcttacctcgacctgcaaatgtggtac
tcggcggtcaacttcggttacgccaacccgcgcctgaacaacgcgctgaaacagcagatc
gacaccctgccgcaaatcgccagccaatatctgcacaaaggcaaaatcgagctgtcggaa
atgatcgccgtggacgccaagaagaagttcggcctcgatggtcgcgtgcacttcaacgtc
ggcggttcgcagtccatcgaggactcgctgaaagtcgtgcgtaacgccagcaacggcaag
agcctgatgttcgccttcgaaggcggttatcacggtcgcaccctcggcgcctcgtcgatc
acttccagctaccgctatcgtcgccgctacggccacttcggcgagcgcgccaacttcatc
ccgttcccgtaccacttccgtggcccgaaaggcatgaccaaggaagaatacggcagccac
tgcgtgcagcagttcgcccgtctgttcgagactgaatacaacggtgtctgggatccgaag
gtcggcgccagtgaatacgctgcgttctacgtcgagccgatccagggcaccggcggctac
gtgattccgccgatgaacttctacagcgaactcaagcatgtgctggaccagcacggcatc
ctgatggtggtcgacgaaatccagatgggcttctatcgcaccggcaagctgtggtcgatc
gaacacttcgacgtcaaaccggacgtgatcgtcttcggcaaggcactgaccaacggcctc
aacccgctgggcggcatctgggccaaggaagaactgatcaacccgaaagtcttcccgcca
ggttcgacccactccaccttcgcctccaacccgctgggcaccgccgtgggcctggaaatg
ttcaagatgaccagcgaagtcgactacggcgcgatggtcatggccaagggcaaatacttc
ctcgaaggcctgcaggacctgcagaaacgctacccgatcatcggcgacgtcgatggcctg
ggcctggccctgcgctgcgaaatctgcgccccggacggcttcaccccggacaaggccacc
ctggacttcatggtcgaggaaggcatgaaaggcgacatcgagatcgacggccgcaaactg
ggcctgatcctcgacgtgggcggttactacaagaacgtgatcaccctcgcgccgtcgctg
gaaatcagctacccggaaatcgacctgggcatcgccctgctcgaccgtctgctggcccgg
gcgatgaaacgatga
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