Pseudomonas sp. Stari2: NH234_25750
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Entry
NH234_25750 CDS
T10554
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00260
Glycine, serine and threonine metabolism
psdt00460
Cyanoamino acid metabolism
psdt00630
Glyoxylate and dicarboxylate metabolism
psdt00670
One carbon pool by folate
psdt00680
Methane metabolism
psdt01100
Metabolic pathways
psdt01110
Biosynthesis of secondary metabolites
psdt01120
Microbial metabolism in diverse environments
psdt01200
Carbon metabolism
psdt01230
Biosynthesis of amino acids
psdt01240
Biosynthesis of cofactors
psdt04981
Folate transport and metabolism
Module
psdt_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NH234_25750
09102 Energy metabolism
00680 Methane metabolism
NH234_25750
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NH234_25750
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NH234_25750
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NH234_25750
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NH234_25750
Enzymes [BR:
psdt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NH234_25750
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
XCX99691
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Position
5623834..5625087
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMAGV
FIERGFDVVSGGTENHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctttttgccgccatggag
caagaagcccagcgccaggaagaacacatcgagctgatcgcttcggagaactacaccagc
ccagcggtgatggaagctcaaggctcggttctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggttgcgagtacgtcgacgttgttgagcaactggccatcgac
cgcgccaaggaactgttcggcgccgactacgccaacgttcagccgcacgctggttcccaa
gccaacgccgctgtctacctggccctgctgtcggccggtgacaccatcctgggcatgagc
ctggctcacggcggtcacctgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgccatccagtacggcatcgacgccaacggcctgatcgactacgacgaagtcgagcgt
ctggcggttgagcacaagccgaaaatgatcgtggccggtttctctgcctactcgcagatc
ctcgacttcccgcgcttccgcgccatcgccgacaaggttggcgcctacctgttcgtcgac
atggctcacgtggccggtctggtcgccgctggcgtctacccgaacccggttccattcgct
gacgtcgtgaccaccaccacccacaagaccctgcgcggtcctcgtggtggcctgatcctg
gctcgcgccaacgccgacatcgagaagaagctgaactccgctgttttcccgggcgcccag
ggtggcccgctggagcacgtgatcgccgccaaagcgatctgcttcaaggaagcactgcag
cctgagttcaaggcttaccagcaacaagtggtgaaaaacgcccaggccatggccggcgtg
ttcatcgagcgcggtttcgacgtggtttccggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaggaaatctccggtaaagacgccgacgccgctctgggcaaagcgttc
atcaccgtgaacaagaactccgtgccaaacgacccacgctccccgttcgtcacttccggc
ctgcgcttcggtactccggctgtgaccactcgcggcttcaaggaagcagagtgcaaagag
ctggccggctggatctgcgacatcctggctgatctgaacaacgaagcggtgatcgacgcc
gttcgtgagaaagtcaaagccatctgcaagaaactgccggtatacggcgcttaa
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