KEGG   Pseudomonas sp. Stari2: NH234_25980
Entry
NH234_25980       CDS       T10554                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psdt  Pseudomonas sp. Stari2
Pathway
psdt03030  DNA replication
psdt03430  Mismatch repair
psdt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psdt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NH234_25980
   03430 Mismatch repair
    NH234_25980
   03440 Homologous recombination
    NH234_25980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psdt03032]
    NH234_25980
   03400 DNA repair and recombination proteins [BR:psdt03400]
    NH234_25980
Enzymes [BR:psdt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NH234_25980
DNA replication proteins [BR:psdt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NH234_25980
DNA repair and recombination proteins [BR:psdt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NH234_25980
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ribosomal_L26 RNase_H_2 DUF1059
Other DBs
NCBI-ProteinID: XCX99736
LinkDB
Position
complement(5670913..5671518)
AA seq 201 aa
MERIAVIDFETTGISPSSSCRATEIAVVMLENGRIVERYQSLMNAGVRVPAFIEQLTGIS
NAMLRTAPSAEQVMNEVNEFVGCTPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFAQLPHTGQAHRAMADAEMAANLLAHLTDELRHKHGVRELSHD
LLCKLQKVPAAKVGEHLQRYR
NT seq 606 nt   +upstreamnt  +downstreamnt
ttggaacgcattgcagtcatcgactttgaaaccaccggcatttcgccgagcagcagttgc
cgggccacggaaattgccgtggtcatgctggaaaacggccgtatcgtcgagcgttaccag
agcctgatgaacgccggcgtgcgcgtcccggccttcatcgaacaactcaccggcatcagc
aacgccatgctgcgcaccgctccgtcggccgaacaggtgatgaacgaagtcaacgaattc
gtcggctgcacgcccctgctggcgcacaacgccgcgttcgaccagaagttctgggacttc
gaactgggccggatcaaacgtacccgcctgcagaactttgcttgttcgctgttgttggcc
cggcgtttgatgccagcggcgccgaaccacaagctcggcacgctcaccacctttgcccaa
ttgccgcataccggccaggcgcacagggcgatggcggatgcggagatggcggcgaatttg
ctggcgcatctgacagatgagttgcggcacaagcatggcgtgagggagctatcgcacgac
ctgctgtgcaaattgcagaaagtaccggccgccaaggtcggcgagcacttgcagcgctat
cgctga

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