Pseudomonas sp. Stari2: NH234_26985
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Entry
NH234_26985 CDS
T10554
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt02020
Two-component system
psdt02024
Quorum sensing
psdt02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NH234_26985 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NH234_26985 (crp)
02025 Biofilm formation - Pseudomonas aeruginosa
NH234_26985 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psdt03000
]
NH234_26985 (crp)
Transcription factors [BR:
psdt03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
NH234_26985 (crp)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR_2
TrmB
MarR
HTH_11
HTH_28
Motif
Other DBs
NCBI-ProteinID:
XCX99927
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Position
5870574..5871218
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AA seq
214 aa
AA seq
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MVGITPTPKIKNLDKLLMHCQRRRHAAKSNIICAGDRSDTLYFIIRGSVTILIEDDDGRE
MIIAYLNAGDFFGELGLFEQAGQEQERSAWVRAKVECEVAEISYAKFRELSQQDPDILYV
LSGQIAQRLRNTTRKVGDLAFFDVTGRVARCLLELCKQPDAMTHPDGMQIKVTRQEIGRI
VGCSREMVGRVLKDLEERNLVDVKGKTMVVFGTR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggttggtattacccccacacctaaaatcaagaacctcgacaagctgctgatgcattgc
cagcgccggcgccatgcggccaagagcaacatcatctgcgccggggatcgctcggacacg
ctgtacttcattatccgcggctcggtcacgatcctgatcgaggacgacgacggccgcgag
atgatcatcgcgtacctgaatgccggggatttcttcggcgagctgggcctgttcgaacag
gccggccaggaacaggagcgcagtgcctgggtgcgggccaaggtcgagtgcgaagtcgcg
gaaatcagctacgccaaattccgtgagttgtcgcagcaggatccagacattctttacgtg
ctcagcggacaaatcgcacaacgcctgcgcaacaccacgcgcaaggtcggcgatctggcg
ttcttcgacgtcactggccgtgttgctcgctgcctgctggagctgtgcaagcaacccgac
gcgatgacccacccggacggcatgcagatcaaggtcacccgccaggaaatcgggcggatt
gtcggttgttcgcgggagatggtcggtcgcgtgctcaaggatcttgaagaacgcaacctg
gtggatgtgaaaggcaagaccatggtggtcttcggcactcgctga
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