Pseudomonas sp. Stari2: NH234_27050
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Entry
NH234_27050 CDS
T10554
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NH234_27050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdt02000
]
NH234_27050
Transporters [BR:
psdt02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NH234_27050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_25
nSTAND_NTPase5
AAA_22
nSTAND3
FeoB_N
AAA_28
AAA_29
Rad17
Motif
Other DBs
NCBI-ProteinID:
XCX99940
LinkDB
All DBs
Position
complement(5884546..5885670)
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AA seq
374 aa
AA seq
DB search
MSQVESNAGASDVLVSFRGVQKSYDGENLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMM
LAGFETPTAGEILLAGRAINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLTVRGLNKS
DVSDKVKKVLSMVQLDAFASRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQL
REHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRTLYEEPKNT
FVANFIGENNRLNGRLLSQSGERCVVELGRGEKVEALAVNIGQTGEPVTLSIRPERVSLN
GSSDQCVNRFSGRVAEFIYLGDHVRVRLEVCGKTDFFVKQPIAELDPALAVGDVVPLGWQ
VEHVRALDPLLEAH
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggtcgaatcaaacgcaggggccagcgatgtgctggtcagctttcgtggagtg
cagaagagctacgacggcgagaacctgatcgtcaaagacctcaacctggacatccgcaag
ggcgaattcctgaccctgctcgggccgtccggctccggcaagaccaccagcctgatgatg
ctcgccggtttcgaaacaccaaccgccggggaaatcctcctggccggacgcgcgatcaac
aacgtgccgccgcacaagcgcgacatcggcatggtgttccagaactacgcgctgttcccg
cacatgaccgtcgccgagaacctggcgttcccgctgaccgtgcgcggcctgaacaagagc
gacgtcagcgacaaggtcaagaaagtcctgagcatggtccagctcgatgccttcgcttcg
cgctatccggcgcagttgtccggcggccagcaacaacgtgtggcgctggcccgtgcgctg
gtcttcgagccgcaactggtgctgatggacgaaccgctcggcgctctcgacaagcagctg
cgcgaacacatgcagatggaaatcaaacacctgcaccagcgcctcggcgtgaccgtggtc
tacgtgacccacgaccagggcgaagccctgaccatgtccgaccgcgtcgccgtgtttcat
cagggtgagatccagcagatcgccccgccgcgcaccctctacgaagagccgaaaaacacc
ttcgtcgccaacttcatcggcgagaacaaccgcctcaacggtcgtctgctcagccagagc
ggcgagcgctgtgtggtcgagctgggtcgtggggaaaaggtcgaggcgctggcggtcaac
atcggccagaccggcgaacccgtcaccctgtcgatccggccggagcgcgtcagcctcaac
ggttcgagcgatcaatgcgtcaaccgcttctccgggcgggtggccgaattcatctatctg
ggcgaccacgtccgggtgcgcctggaagtctgcggcaagaccgacttcttcgtgaaacaa
ccgattgccgagctcgatcctgcgctcgcggtcggcgacgtggttccgcttggctggcag
gtcgagcacgttcgcgcgcttgatcctcttctagaggcgcattaa
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