Pseudomonas sp. Stari2: NH234_27450
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Entry
NH234_27450 CDS
T10554
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt00260
Glycine, serine and threonine metabolism
psdt01100
Metabolic pathways
Module
psdt_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NH234_27450
Enzymes [BR:
psdt01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
NH234_27450
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
NH234_27450
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_binding_2
FAD_oxidored
DAO
NAD_binding_8
HI0933_like
Pyr_redox_3
GIDA
FAD_binding_3
Thi4
Pyr_redox
AlaDh_PNT_C
Lycopene_cycl
Fer2_BFD
Motif
Other DBs
NCBI-ProteinID:
XCY00019
LinkDB
All DBs
Position
complement(5976773..5979790)
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AA seq
1005 aa
AA seq
DB search
MSQTNRLSNGGRIDRNKVLSFTFNGQTYKGFEGDSLAAALLANGVDIIGRSFKYSRPRGI
FAAGAEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPSVNNDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTEVDPDTYDYMNQHCDVLIVGAGP
AGLAAALAAARSGARVIIADEQEEFGGSLLDSRESLDGKPAMEWVASVIAELKNTPDVLL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRQRIHRVRAKRVVLATGAHERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKLVLTTNNDHAYRVALDWLDASLQVVAIADARSN
PRGALVEEARAKGIRILTGSAVIEARGSKRVTAARVAAIDVKGHKVTSPGEWLDCDLIAS
SGGYSPVVHLASHLGGKPIWREDILGFVPGEAPQKRVCVGGINGVYGLGDSLADGFEGGV
RAASEAGFQTVEGVLPKALSRHEEPTLALFQVPHEKGTSRAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVTIPQMGTTMFRPNYTPVTF
GAVAGRHCGHIFEPVRYTALHQWHLKNGAEFEDVGQWKRPWYFPKNGEDMHAAVKRECKA
VRDSVGLLDASTLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFVMTTTTGGAARVLQWLELYHQTEWPDLKVYFTSVTDHWATMTLSGPNSRKL
LSAVTDIDLANEAFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLEKIVE
AGKQYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGQRGM
NREDCVRDQRKQLVGLKPIDPNVWLPEGAQLVFNTKQSIPMTMVGHVTSSYAHNSLGYSF
AMGVVKGGLKRMGERVFAPLADGSVIEAEIVSSVFFDPKGDRQNI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccaatcgcctgtccaacggtggacggatcgaccgcaacaaagtgctgagc
ttcaccttcaacggccagacttacaaaggtttcgaaggcgactcgctggccgcagccctg
ctggccaacggcgtcgacatcattggccgcagcttcaagtattcgcgtccacgcggcatc
ttcgccgccggtgccgaagagccgaacgcagtgctgcagatcggtgcgaccgaagccacc
cagattccgaacgtgcgtgccacgcaacaggcgttgtaccagggcctggtcgccaccagc
accaacggctggccgagcgtcaacaacgacatgatggggattctcgggaaggtcggcggc
aagctgatgccgccgggtttctactacaaaaccttcatgtatccgcaatcgttctggatg
acttacgagaagtacattcgcaaggcagcaggtttaggtcgttcgccgaccgaggtcgat
ccggacacgtacgactacatgaaccagcactgcgacgtgctgatcgtcggcgccggcccg
gccggtctggcggctgcgctggcggctgcgcgcagcggtgcgcgggtgatcatcgccgat
gaacaggaagagttcggcggcagcctgctcgactcccgcgaaagcctcgacggcaagcct
gcgatggagtgggtggccagtgtcatcgctgaattgaagaacaccccggacgtgctgctg
ttgccgcgcgccacggtcaacggttaccacgaccacaacttcctgaccattcacgaacgc
ctcaccgatcacctcggtgaccgtgctccgatcggccaggtgcgtcagcgcattcaccgc
gtccgcgccaagcgtgtggtgctggcgaccggcgctcacgagcgtccgctggtctacggc
aacaacgacgtgccgggcaacatgctcgccggcgcagtgtcgacctacgtgcgccgttac
ggcgtggcgccgggcaagaagctggtgctgaccaccaacaacgatcacgcctatcgcgtg
gcgctggactggctcgacgccagcctgcaagtggtcgccatcgccgatgcccgcagcaat
ccgcgcggtgcactggtggaggaagcgcgcgccaaaggcattcgcatcctcaccggcagc
gcggtgatcgaggcccgtggcagcaagcgcgttaccgctgcccgcgtggcggcgatcgat
gtcaaaggccacaaggtcaccagcccgggcgaatggctcgactgcgacctgatcgccagc
tccggcggatacagcccggtggttcacttggcgtcgcacctcggtggcaagccgatctgg
cgcgaagacatcctcggtttcgtaccgggcgaagcaccgcagaaacgcgtgtgcgtcggt
ggcatcaacggcgtctacggtctcggcgattccctggccgacggttttgaaggcggcgtg
cgcgctgcgtccgaagccggtttccagaccgtcgaaggtgtattgccgaaagccctgagc
cgtcacgaagaaccgacgctggcgctgttccaggtgccgcatgagaaaggtacttcccgg
gcgccgaagcaattcgtcgacctgcagaacgacgtgaccgccgccgccatcgaactggcg
acccgcgaaggtttcgaatcggtcgagcacgtcaaacgctacaccgcgctgggcttcggc
accgatcagggcaagctcggcaacgtcaacggcctggcgattgccgcccgttcgctgaac
gtgaccatcccgcagatgggcaccacgatgttccgtccgaactacacgccggtgacattc
ggcgcggtagccggccgtcactgcgggcacatcttcgaaccggtgcgttacaccgcgctg
catcaatggcacctgaaaaacggcgccgagttcgaagacgtcggtcagtggaaacgtccg
tggtacttcccgaagaacggtgaagacatgcatgccgcggtcaaacgcgaatgcaaggct
gtgcgcgacagcgttggcctgctggacgcttcgaccctgggcaagatcgacatccagggc
ccggatgcccgcgagttcctcaaccgcgtgtacaccaacgcctggaccaagctcgacgtg
ggcaaggcccgttacggcctgatgtgcaaggaagacggcatggtcttcgacgacggtgtg
acggcgtgtctggccgacaaccatttcgtcatgaccaccaccaccggcggcgcggctcgc
gtcctgcagtggctggagctgtaccaccagaccgaatggccggacctgaaggtgtatttc
acctccgtcaccgaccactgggcgaccatgaccttgtccggcccgaacagccgcaagctg
ctcagcgccgtgaccgacatcgatctggccaacgaagcgttcccgttcatgacctggaaa
gaaggtctggtcggcggtgtgccggcgcgggtattccgcatctcgttcaccggtgagctg
tcgtacgaagtcaacgtccaggccgattacgcgatgggtgtgctggaaaaaatcgtcgag
gcaggcaagcagtacaacctgaccccgtatggcaccgagaccatgcacgtgctgcgggcc
gagaagggcttcatcatcgtcggccaggacaccgacggctcgatgaccccggacgacctg
aacatgggttggtgcgtcggtcgcaccaagccgttctcgtggatcggccagcgcggcatg
aaccgtgaagattgcgtgcgtgaccagcgtaaacagctggtcggcctgaagccgatcgat
ccgaacgtatggctgccggaaggtgcacagctggtgttcaacaccaagcagtcgatcccg
atgaccatggtcggccacgtgacctccagctacgcgcacaactccctcggctattcgttt
gccatgggcgtggtgaagggcggtctgaagcgcatgggcgagcgggtgttcgcaccgctg
gcggacggcagcgtgatcgaggcggaaatcgtttcttcggtgttcttcgatccgaaaggc
gatcgccagaacatctaa
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